CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G025750.1	Barley	cytosol	34.25	58.49
GSMUA_AchrUn_...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	62.43	56.22
CDY11476	Canola	plastid	81.22	22.51
KRH39898	Soybean	nucleus	98.89	15.59
Bra007745.1-P	Field mustard	cytosol	81.22	13.38
Bra007747.1-P	Field mustard	cytosol	81.22	13.38
AT3G63460.1	Thale cress	cytosol	81.22	13.32
CDX76700	Canola	cytosol	80.66	13.3
Bra016539.1-P	Field mustard	cytosol	65.19	12.94
CDX93907	Canola	cytosol	79.01	12.92
CDX79419	Canola	cytosol	77.9	12.76
CDX96696	Canola	cytosol	65.75	12.73
Bra003525.1-P	Field mustard	cytosol	77.35	12.66
CDX67919	Canola	cytosol	77.35	12.64
VIT_13s0158g00140.t01	Wine grape	cytosol	72.38	11.92
CDX83811	Canola	cytosol	61.33	11.86
AT1G18830.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	62.98	11.76
GSMUA_Achr3P08600_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	67.96	11.29
Solyc01g088020.2.1	Tomato	extracellular	69.06	11.12
GSMUA_Achr8P22150_001	Banana	cytosol	68.51	10.98
Zm00001d022378_P003	Maize	cytosol	64.64	10.32
KXG36842	Sorghum	plasma membrane	64.09	10.29
Os07t0657200-01	Rice	plastid	62.98	10.12
Zm00001d007075_P007	Maize	plasma membrane	64.09	9.67
TraesCS2A01G132900.1	Wheat	cytosol	59.67	9.52
TraesCS2D01G135000.1	Wheat	cytosol	59.67	9.52
TraesCS2B01G156400.3	Wheat	golgi	59.67	9.49
GSMUA_AchrUn_...	Banana	extracellular	6.63	5.06
Zm00001d019612_P001	Maize	plastid	8.84	3.36
KRH23912	Soybean	cytosol	0.0	0.0
KRH15712	Soybean	mitochondrion, plastid	0.0	0.0
Zm00001d011587_P001	Maize	nucleus	0.0	0.0
Zm00001d015774_P001	Maize	mitochondrion	0.0	0.0
GSMUA_AchrUn_...	Banana	mitochondrion	0.0	0.0
Zm00001d034411_P001	Maize	nucleus	0.0	0.0
Zm00001d037286_P001	Maize	nucleus	0.0	0.0
Zm00001d051619_P001	Maize	peroxisome	0.0	0.0

Protein Annotations

Gene3D:2.130.10.10	MapMan:22.4.1.2	UniProt:A0A0R0H052	EMBL:ACUP02007161	EnsemblPlantsGene:GLYMA_12G0103002	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	EnsemblPlants:KRH23909
ProteinID:KRH23909	ProteinID:KRH23909.1	ProteinID:KRH23910.1	PFAM:PF00400	ScanProsite:PS00678	PFscan:PS50082
PFscan:PS50294	PANTHER:PTHR13923	PANTHER:PTHR13923:SF11	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI0006EDC5E3
InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	:

Description

hypothetical protein

Coordinates

chr12:+:737377..739409

Molecular Weight (calculated)

19119.4 Da

IEP (calculated)

4.314

GRAVY (calculated)

-0.034

Length

181 amino acids

Sequence
(BLAST)

001: MACIKGVNRS ASVALAPDAP YLAAGTMAGA VDLSFSSSAN LEIFKLDFQS DDQELPLVAE CPSSDRFNRL SWGKNGSGSE DFALGLVAGG MVDGNIDIWN
101: PLTLIRSESN QSSLVGHLVR HKGPVRGLEF NAIAPNLLAS GAEDGEICIW DLVNPSEPTH FPPLKSTGSA SQGEISFLSW N

Best Arabidopsis Sequence Match ( AT1G18830.2 )
(BLAST)

001: MDCIKSIGRS AFVAIAPESP FIAAGTMAGA VDLSFSSSAN LEIFELDFQS NDRELKLVGQ CQSSERFNRL AWGSYGSGSD GLIAGGLVDG NIGLWNPISS
101: ESGEIAHVRD LSKHKGPVRG LEFNVKSPNQ LASGADDGTV CIWDLANPSK PSHYLKGTGS YMQSEISSLS WNKGFQHVLA STSHNGTTVI WDVNNEKIIT
201: DLKTTVRCSV LQWDPDHFNQ ILVASDEDSS PNVKLLDIRY LQSPVRTFVG HQRGVIAMEW CPSDSLYLLT CGKDNRTICW NTKTGKIVAE LPTGQNWNFD
301: VHWYPKMPGV ISASSVDGKI GIYNLEGCSS YGTEVNNLYS DPLTAPKWWK RPAGASFGFG GKLISFNKNL PEASEVFLHS LATEKSLVNR ISKFEAALEN
401: GEKTSLRGLC EKKTEEAESE EEKETWGLLK IMLEEDGNAK TKLRSHLGFS LPSEENDQTA NEPHATCSST NVEETQKVPE PEGEEEESSD PTFDDAIQRS
501: LIVGDYKEAV AQCFSANKMA DALVIAHVGG TELWESTRDK YIRMSNAPYM KVVSAMMNND LMTYLHTRQP KSWKETLALI CTFAEGDEWI SLCDALASNL
601: MAAGFTLAAT LCYICAGNVD KTVDIWSMSL EKQSAGKSYA ECVQDLMEKT LVLALTTCNK RVSASLRKLF ESYAEILASQ GLIATAMKFL KLLESGDFSP
701: ELSILRDRIS LYAEPEAANT SASTNTQPKI SNPYQEKSFT PAPLSNAQPS RSITFFPLNP PRELKNADQY QQPTMDYHSF NRSAGPAYNA PPGPGSYRSI
801: HSQVGPYINS KIPQTVAPPV RPMTPTHQVA VQPEPVAPPP TVQTADTSNV PAHQKPIVAS LTRLFKETFE PLRGYSRDTP AKKREAEDNC SRKLGALFSK
901: LNNGDISKNA AEKLTQLCQA LDKRDFGAAL KIQGLMTSTE WDECSSWLPT LKKMIVTGRQ NVR

Arabidopsis Description

SEC31AProtein transport protein SEC31 homolog A [Source:UniProtKB/Swiss-Prot;Acc:F4ICD9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.