Factsheet for GSMUA_Achr3P08600_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, mitochondrion, plastid, cytosol, plasma membrane, golgi

Predictor Summary:

nucleus 1
mitochondrion 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid, secretory
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	14.33	77.61
GSMUA_AchrUn_...	Banana	mitochondrion	55.28	74.6
GSMUA_Achr8P22150_001	Banana	cytosol	75.3	72.63
GSMUA_AchrUn_...	Banana	extracellular	15.52	71.31
KRH23909	Soybean	cytosol	11.29	67.96
VIT_13s0158g00140.t01	Wine grape	cytosol	62.08	61.51
Solyc01g088020.2.1	Tomato	extracellular	61.98	60.05
CDY11476	Canola	plastid	35.54	59.26
Os07t0657200-01	Rice	plastid	61.16	59.09
KXG36842	Sorghum	plasma membrane	61.16	59.09
Zm00001d022378_P003	Maize	cytosol	61.34	58.91
KRH23912	Soybean	cytosol	48.39	57.6
HORVU7Hr1G058340.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	5.6	57.55
KRH15712	Soybean	mitochondrion, plastid	9.27	57.39
KRH39898	Soybean	nucleus	60.06	56.97
TraesCS2A01G132900.1	Wheat	cytosol	59.23	56.83
Bra007745.1-P	Field mustard	cytosol	57.3	56.78
TraesCS2D01G135000.1	Wheat	cytosol	59.14	56.74
AT3G63460.1	Thale cress	cytosol	57.48	56.7
Bra007747.1-P	Field mustard	cytosol	57.02	56.51
TraesCS2B01G156400.3	Wheat	golgi	58.86	56.33
CDX76700	Canola	cytosol	56.75	56.28
CDX79419	Canola	cytosol	56.93	56.11
Bra003525.1-P	Field mustard	cytosol	56.57	55.7
CDX67919	Canola	cytosol	56.66	55.69
CDX93907	Canola	cytosol	56.47	55.56
HORVU2Hr1G023350.3	Barley	cytosol, plastid	55.28	55.33
Bra016539.1-P	Field mustard	cytosol	46.1	55.04
Zm00001d007075_P007	Maize	plasma membrane	60.33	54.8
CDX96696	Canola	cytosol	46.46	54.12
AT1G18830.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	47.75	53.66
CDX83811	Canola	cytosol	45.18	52.56
Zm00001d011587_P001	Maize	nucleus	7.9	46.74
Zm00001d034411_P001	Maize	nucleus	7.16	45.35
Zm00001d037286_P001	Maize	nucleus	7.07	44.77
HORVU7Hr1G058330.1	Barley	cytosol, plastid	3.12	40.0
Zm00001d015774_P001	Maize	mitochondrion	6.61	36.36
Zm00001d019612_P001	Maize	plastid	15.24	34.87
Zm00001d051619_P001	Maize	peroxisome	2.02	28.57

Protein Annotations

Gene3D:1.20.940.10	Gene3D:1.25.40.1030	Gene3D:2.130.10.10	MapMan:22.4.1.2	InterPro:ACE1_Sec16_Sec31	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSMUA_Achr3G08600_001	EnsemblPlants:GSMUA_Achr3P08600_001	EnsemblPlants:GSMUA_Achr3T08600_001	InterPro:IPR001680
InterPro:IPR015943	InterPro:IPR017986	UniProt:M0SCX7	PFAM:PF12931	ScanProsite:PS00678	PFscan:PS50082
PFscan:PS50294	PANTHER:PTHR13923	PANTHER:PTHR13923:SF11	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI000294D2B9
InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg

Description

Putative Protein transport protein Sec31A [Source:GMGC_GENE;Acc:GSMUA_Achr3G08600_001]

Coordinates

chr3:+:6192522..6214877

Molecular Weight (calculated)

118421.0 Da

IEP (calculated)

5.956

GRAVY (calculated)

-0.254

Length

1089 amino acids

Sequence
(BLAST)

0001: MACIKSAARS ALVAFAPDAP YLAAGTMAGA VDLSFSSSAT LEIFKLDFQS DAHELPVAGA CPSAERFNRL SWGKPPGSAS EEYALGLVAG GLGDGSIGVW
0101: NPHKLISSED QSGAFVAKLE NHVGPVRGLE FSSLSSNLLA SGADEGELCI WDLAKPSEPS HFPSLRSVGS GAQTEVSFVS WNPKFQHILA STSVNGMTVV
0201: WDLRQQKPIT RQVFYVNRRR CSVLQWNPDV STQLIIASDD DSSPALRVWD VRKTISPLRE FVGHTKGCVI AMSWCPYDSS LLLTCAKDNR TICWDTTSGE
0301: IISELPASTN WNFDIHWYPK IPGVISASSF DVKVGIYNIE ACSRYAAVEG EFGVPVRLRA PKWLKCPTGV SFGFGGKLIS FKTSQTSPGV PPSASEVYVY
0401: NLVTEHSLVS RSTEFEAAIQ NGEKASLRAL CEKKLHDSIL EDDKETWNFL KIMFEEEGTA RTKLLSHLGF SIPDESTDIT YDDLGKQLEN TLGRDNNLLV
0501: EEPEEPMGTH GASFDDTIQR ALVVGDYKGA VLQCITANRM ADALVIAHAG GSSLWESTRD QYLRNSLTPY LKVVSAMVNN DLMNLINTRP LNSWKETLAL
0601: LCTFAQKEEW TVLCDNLASR LVTVGNMLAA TLCYICAGNI DRTVEIWSHS LKPDCEGRTY VDLLQDLMEK TIVLTLATGH KRFSASLSKL VENYAELLAN
0701: QGLLTTAMEY LKLLGSEESS HELAILRDRI SLSAEEREAP KNLCYESTTS QANSGYGADH TGFGTIDQSQ NYYQDKSLPQ PHHSVAGNPH AEGYHQSPGS
0801: AYGGYQHVLQ KPQFHDFSNP MPFQPAQPGQ MFIPSQTSHV PEQNFNPPAA AVQPTIKPFV PTTPAALRNV EHYQQPSLGS QLYPGVANSV YQPGPPIPAS
0901: HGVGASQPAA GTGHRFSQPA GPVSAPRGFM PVPNSNFTQM PGMSPAQPSS PTKPPQPQSV TVPSAPPPTV QTVDTSNVPA ELKPVIATLT RLYDETSAAL
1001: GGPHANPSKK REIEDNSRRI GSLFGKLNGG DISPDAAAKL VQLCQALDAG DFAGALHIQV ELTTRYWDEC NFWLAPLKRM IKTRQSIRF

Best Arabidopsis Sequence Match ( AT3G63460.1 )
(BLAST)

0001: MACIKGVGRS ASVALAPDAP YMAAGTMAGA VDLSFSSSAN LEIFKLDFQS DDRDLPLVGE IPSSERFNRL AWGRNGSGSE EFALGLIAGG LVDGNIDLWN
0101: PLSLIGSQPS ENALVGHLSV HKGPVRGLEF NAISSNLLAS GADDGEICIW DLLKPSEPSH FPLLKGSGSA TQGEISFISW NRKVQQILAS TSYNGTTVIW
0201: DLRKQKPIIN FADSVRRRCS VLQWNPNVTT QIMVASDDDS SPTLKLWDMR NIMSPVREFT GHQRGVIAME WCPSDSSYLL TCAKDNRTIC WDTNTAEIVA
0301: ELPAGNNWNF DVHWYPKIPG VISASSFDGK IGIYNIEGCS RYGVEENNFG TAPLKAPKWY KRPVGASFGF GGKLVSCHAR APAKGTSSIL SEVFLHSLVT
0401: EQSLVSRTSE FEAAIENGDM TSLRGLCEKK SEETESEEEK ETWGLLKIMF EEEGTSRTKL ISHLGFTLPV AEKDQAVDGL SSDLNGIRLE DTAADALDLD
0501: DSNEAAAFAM DNGEDFFNNF PAKPDTPVST SAKDFMPSDT DFSTKGEETQ EMQEEEEESS DPVFDNAIQR ALIVGDYKEA VDQCITANKM ADALVIAHVG
0601: GTALWESTRE KYLKTSSAPY MKVVSAMVNN DLRSLIYTRS HKFWKETLAL LCTFAQGEQW TTLCDALASK LMAAGNTLAA VLCYICAGNV DRTVEIWSRS
0701: LANERDGRSY AELLQDLMEK TLVLALATGN KKFSASLCKL FESYAEILAS QGLLTTAMKY LKVLDSGGLS PELSILRDRI SLSAEPETNT TASGNTQPQS
0801: TMPYNQEPTQ AQPNVLANPY DNQYQQPYTD SYYVPQVSHP PMQQPTMFMP HQAQPAPQPS FTPAPTSNAQ PSMRTTFVPS TPPALKNADQ YQQPTMSSHS
0901: FTGPSNNAYP VPPGPGQYAP SGPSQLGQYP NPKMPQVVAP AAGPIGFTPM ATPGVAPRSV QPASPPTQQA AAQAAPAPAT PPPTVQTADT SNVPAHQKPV
1001: IATLTRLFNE TSEALGGARA NTTKKREIED NSRKLGALFV KLNSGDISKN AADKLAQLCQ ALDNNDFSTA LQIQVLLTTS EWDECNFWLA TLKRMMVKAR
1101: QNVR

Arabidopsis Description

SEC31BProtein transport protein SEC31 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q8L611]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.