Factsheet for GSMUA_AchrUn_randomP13470_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol, golgi, plasma membrane, vacuole, endoplasmic reticulum, mitochondrion, plastid

Predictor Summary:

nucleus 2
mitochondrion 3
extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid, secretory
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH23909	Soybean	cytosol	56.22	62.43
HORVU7Hr1G058340.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	31.34	59.43
HORVU7Hr1G058330.1	Barley	cytosol, plastid	13.93	32.94
CDY11476	Canola	plastid	58.21	17.92
GSMUA_Achr3P08600_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	77.61	14.33
GSMUA_Achr8P22150_001	Banana	cytosol	76.62	13.64
AT3G63460.1	Thale cress	cytosol	63.18	11.5
Bra016539.1-P	Field mustard	cytosol	51.74	11.4
CDX96696	Canola	cytosol	52.24	11.23
CDX79419	Canola	cytosol	60.2	10.95
AT1G18830.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	52.74	10.94
CDX76700	Canola	cytosol	59.2	10.84
KRH39898	Soybean	nucleus	61.69	10.8
CDX83811	Canola	cytosol	50.25	10.79
Bra003525.1-P	Field mustard	cytosol	59.2	10.76
CDX67919	Canola	cytosol	59.2	10.74
Bra007747.1-P	Field mustard	cytosol	58.71	10.74
Bra007745.1-P	Field mustard	cytosol	58.71	10.74
CDX93907	Canola	cytosol	58.71	10.66
Solyc01g088020.2.1	Tomato	extracellular	58.71	10.5
KXG36842	Sorghum	plasma membrane	58.21	10.38
Zm00001d022378_P003	Maize	cytosol	57.71	10.23
Os07t0657200-01	Rice	plastid	57.21	10.2
TraesCS2D01G135000.1	Wheat	cytosol	55.72	9.87
TraesCS2A01G132900.1	Wheat	cytosol	55.72	9.87
TraesCS2B01G156400.3	Wheat	golgi	55.72	9.84
Zm00001d007075_P007	Maize	plasma membrane	58.71	9.84
VIT_13s0158g00140.t01	Wine grape	cytosol	53.23	9.74
HORVU2Hr1G023350.3	Barley	cytosol, plastid	36.32	6.71
Zm00001d019612_P001	Maize	plastid	6.97	2.94
Zm00001d051619_P001	Maize	peroxisome	1.0	2.6
KRH15712	Soybean	mitochondrion, plastid	1.99	2.27
Zm00001d011587_P001	Maize	nucleus	1.99	2.17
Zm00001d034411_P001	Maize	nucleus	1.49	1.74
Zm00001d037286_P001	Maize	nucleus	1.49	1.74
GSMUA_AchrUn_...	Banana	extracellular	1.49	1.27
KRH23912	Soybean	cytosol	4.98	1.09
Zm00001d015774_P001	Maize	mitochondrion	1.0	1.01
GSMUA_AchrUn_...	Banana	mitochondrion	3.98	0.99

Protein Annotations

Gene3D:2.130.10.10	MapMan:22.4.1.2	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSMUA_AchrUn_randomG13470_001
EnsemblPlants:GSMUA_AchrUn_randomP13470_001	EnsemblPlants:GSMUA_AchrUn_randomT13470_001	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	UniProt:M0U8V6
PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR13923	PANTHER:PTHR13923:SF11	SMART:SM00320	SUPFAM:SSF50978
UniParc:UPI000295DB17	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	:

Description

WD domain, G-beta repeat domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG13470_001]

Coordinates

chrchrUn_random:-:64252259..64255827

Molecular Weight (calculated)

21623.8 Da

IEP (calculated)

4.566

GRAVY (calculated)

0.083

Length

201 amino acids

Sequence
(BLAST)

001: MACIKSASRS ALVAFAPDAP YLAAGTMAGA VDLSFSSTAN LEIFKLDFQS DAHDLPVAGS CPSAERFNRL SWGNPPGSAS EEYALGLVAG GLSDGSIGIW
101: NPLKMISSDD QNTALVAKLE KHVGPVRGLE FSVLSSNLLA SGADEGELCI WDLAKPSEPN HFPSLKIMLD AQNVRIYIKV GMEDWQWSFF LNLERLLLKF
201: S

Best Arabidopsis Sequence Match ( AT3G63460.3 )
(BLAST)

0001: MACIKGVGRS ASVALAPDAP YMAAGTMAGA VDLSFSSSAN LEIFKLDFQS DDRDLPLVGE IPSSERFNRL AWGRNGSGSE EFALGLIAGG LVDGNIDLWN
0101: PLSLIGSQPS ENALVGHLSV HKGPVRGLEF NAISSNLLAS GADDGEICIW DLLKPSEPSH FPLLKGSGSA TQGEISFISW NRKVQQILAS TSYNGTTVIW
0201: DLRKQKPIIN FADSVRRRCS VLQWNPNVTT QIMVASDDDS SPTLKLWDMR NIMSPVREFT GHQRGVIAME WCPSDSSYLL TCAKDNRTIC WDTNTAEIVA
0301: ELPAGNNWNF DVHWYPKIPG VISASSFDGK IGIYNIEGCS RYGVEENNFG TAPLKAPKWY KRPVGASFGF GGKLVSCHAR APAKGTSSIL SESLVSRTSE
0401: FEAAIENGDM TSLRGLCEKK SEETESEEEK ETWGLLKIMF EEEGTSRTKL ISHLGFTLPV AEKDQAVDGL SSDLNGIRLE DTAADALDLD DSNEAAAFAM
0501: DNGEDFFNNF PAKPDTPVST SAKDFMPSDT DFSTKGEETQ EMQEEEEESS DPVFDNAIQR ALIVGDYKEA VDQCITANKM ADALVIAHVG GTALWESTRE
0601: KYLKTSSAPY MKVVSAMVNN DLRSLIYTRS HKFWKETLAL LCTFAQGEQW TTLCDALASK LMAAGNTLAA VLCYICAGNV DRTVEIWSRS LANERDGRSY
0701: AELLQDLMEK TLVLALATGN KKFSASLCKL FESYAEILAS QGLLTTAMKY LKVLDSGGLS PELSILRDRI SLSAEPETNT TASGNTQPQS TMPYNQEPTQ
0801: AQPNVLANPY DNQYQQPYTD SYYVPQVSHP PMQQPTMFMP HQAQPAPQPS FTPAPTSNAQ PSMRTTFVPS TPPALKNADQ YQQPTMSSHS FTGPSNNAYP
0901: VPPGPGQYAP SGPSQLGQYP NPKMPQVVAP AAGPIGFTPM ATPGVAPRSV QPASPPTQQA AAQAAPAPAT PPPTVQTADT SNVPAHQKPV IATLTRLFNE
1001: TSEALGGARA NTTKKREIED NSRKLGALFV KLNSGDISKN AADKLAQLCQ ALDNNDFSTA LQIQVLLTTS EWDECNFWLA TLKRMMVKAR QNVR

Arabidopsis Description

SEC31BProtein transport protein SEC31 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q8L611]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.