Factsheet for GSMUA_AchrUn_randomP13460_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
golgi 5
plasma membrane 6
endoplasmic reticulum 5
vacuole 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11476	Canola	plastid	59.49	21.59
GSMUA_Achr3P08600_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	71.31	15.52
VIT_13s0158g00140.t01	Wine grape	cytosol	64.98	14.01
GSMUA_Achr8P22150_001	Banana	cytosol	65.4	13.73
KXG36842	Sorghum	plasma membrane	64.98	13.66
Zm00001d022378_P003	Maize	cytosol	64.56	13.49
HORVU2Hr1G023350.3	Barley	cytosol, plastid	61.18	13.33
Os07t0657200-01	Rice	plastid	62.45	13.13
CDX79419	Canola	cytosol	60.76	13.03
Bra003525.1-P	Field mustard	cytosol	60.76	13.02
CDX67919	Canola	cytosol	60.76	13.0
Solyc01g088020.2.1	Tomato	extracellular	61.6	12.99
KRH23912	Soybean	cytosol	49.79	12.9
TraesCS2D01G135000.1	Wheat	cytosol	61.6	12.86
TraesCS2A01G132900.1	Wheat	cytosol	61.6	12.86
CDX76700	Canola	cytosol	59.49	12.84
Bra007747.1-P	Field mustard	cytosol	59.49	12.83
Bra007745.1-P	Field mustard	cytosol	59.49	12.83
TraesCS2B01G156400.3	Wheat	golgi	61.6	12.83
CDX93907	Canola	cytosol	59.92	12.83
Zm00001d007075_P007	Maize	plasma membrane	64.56	12.76
AT3G63460.1	Thale cress	cytosol	58.65	12.59
KRH39898	Soybean	nucleus	60.34	12.46
Bra016539.1-P	Field mustard	cytosol	46.41	12.06
CDX96696	Canola	cytosol	46.84	11.87
CDX83811	Canola	cytosol	46.41	11.75
AT1G18830.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	47.68	11.66
KRH23909	Soybean	cytosol	5.06	6.63
Zm00001d019612_P001	Maize	plastid	9.28	4.62
KRH15712	Soybean	mitochondrion, plastid	2.95	3.98
HORVU7Hr1G058340.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	1.27	2.83
Zm00001d015774_P001	Maize	mitochondrion	2.11	2.53
Zm00001d034411_P001	Maize	nucleus	1.27	1.74
Zm00001d037286_P001	Maize	nucleus	1.27	1.74
Zm00001d011587_P001	Maize	nucleus	1.27	1.63
GSMUA_AchrUn_...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	1.27	1.49
GSMUA_AchrUn_...	Banana	mitochondrion	5.06	1.49
Zm00001d051619_P001	Maize	peroxisome	0.42	1.3
HORVU7Hr1G058330.1	Barley	cytosol, plastid	0.42	1.18

Protein Annotations

Gene3D:2.130.10.10	MapMan:22.4.1.2	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSMUA_AchrUn_randomG13460_001	EnsemblPlants:GSMUA_AchrUn_randomP13460_001	EnsemblPlants:GSMUA_AchrUn_randomT13460_001	InterPro:IPR001680
InterPro:IPR015943	InterPro:IPR017986	UniProt:M0U8V5	ScanProsite:PS00678	PFscan:PS50294	PANTHER:PTHR13923
PANTHER:PTHR13923:SF11	SMART:SM00320	SUPFAM:SSF50978	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000296FC3A
InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg

Description

WD domain, G-beta repeat domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG13460_001]

Coordinates

chrchrUn_random:-:64243306..64252157

Molecular Weight (calculated)

26801.8 Da

IEP (calculated)

6.496

GRAVY (calculated)

0.026

Length

237 amino acids

Sequence
(BLAST)

001: MNSCYFFVML VSLWFFESAG SGAQTEVSFV SWNPKFQHIL SSTSYNGITV VWDLRQQKPE WLLFSNSFAD SNRRRCSILQ WNPDVSTQLI IASDDDNSPA
101: LRVWDVRKTI SPVREFVGHT KGRVIAMSWC PYDSSFLLTC AKDNRTICWD TISGEVVCEL PASTNWNFDV HWYPKIPGVI SASSFDVKVG IYNIEACSRY
201: AAVGGEFGTP GMVAFLTTVV FPFLLLDTFL HKRDSGR

Best Arabidopsis Sequence Match ( AT3G63460.1 )
(BLAST)

0001: MACIKGVGRS ASVALAPDAP YMAAGTMAGA VDLSFSSSAN LEIFKLDFQS DDRDLPLVGE IPSSERFNRL AWGRNGSGSE EFALGLIAGG LVDGNIDLWN
0101: PLSLIGSQPS ENALVGHLSV HKGPVRGLEF NAISSNLLAS GADDGEICIW DLLKPSEPSH FPLLKGSGSA TQGEISFISW NRKVQQILAS TSYNGTTVIW
0201: DLRKQKPIIN FADSVRRRCS VLQWNPNVTT QIMVASDDDS SPTLKLWDMR NIMSPVREFT GHQRGVIAME WCPSDSSYLL TCAKDNRTIC WDTNTAEIVA
0301: ELPAGNNWNF DVHWYPKIPG VISASSFDGK IGIYNIEGCS RYGVEENNFG TAPLKAPKWY KRPVGASFGF GGKLVSCHAR APAKGTSSIL SEVFLHSLVT
0401: EQSLVSRTSE FEAAIENGDM TSLRGLCEKK SEETESEEEK ETWGLLKIMF EEEGTSRTKL ISHLGFTLPV AEKDQAVDGL SSDLNGIRLE DTAADALDLD
0501: DSNEAAAFAM DNGEDFFNNF PAKPDTPVST SAKDFMPSDT DFSTKGEETQ EMQEEEEESS DPVFDNAIQR ALIVGDYKEA VDQCITANKM ADALVIAHVG
0601: GTALWESTRE KYLKTSSAPY MKVVSAMVNN DLRSLIYTRS HKFWKETLAL LCTFAQGEQW TTLCDALASK LMAAGNTLAA VLCYICAGNV DRTVEIWSRS
0701: LANERDGRSY AELLQDLMEK TLVLALATGN KKFSASLCKL FESYAEILAS QGLLTTAMKY LKVLDSGGLS PELSILRDRI SLSAEPETNT TASGNTQPQS
0801: TMPYNQEPTQ AQPNVLANPY DNQYQQPYTD SYYVPQVSHP PMQQPTMFMP HQAQPAPQPS FTPAPTSNAQ PSMRTTFVPS TPPALKNADQ YQQPTMSSHS
0901: FTGPSNNAYP VPPGPGQYAP SGPSQLGQYP NPKMPQVVAP AAGPIGFTPM ATPGVAPRSV QPASPPTQQA AAQAAPAPAT PPPTVQTADT SNVPAHQKPV
1001: IATLTRLFNE TSEALGGARA NTTKKREIED NSRKLGALFV KLNSGDISKN AADKLAQLCQ ALDNNDFSTA LQIQVLLTTS EWDECNFWLA TLKRMMVKAR
1101: QNVR

Arabidopsis Description

SEC31BProtein transport protein SEC31 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q8L611]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.