Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH39898 | Soybean | nucleus | 94.21 | 75.09 |
| KRH15712 | Soybean | mitochondrion, plastid | 14.1 | 73.3 |
| VIT_13s0158g00140.t01 | Wine grape | cytosol | 72.35 | 60.24 |
| Solyc01g088020.2.1 | Tomato | extracellular | 68.09 | 55.43 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 46.89 | 53.16 |
| AT3G63460.1 | Thale cress | cytosol | 62.08 | 51.45 |
| Bra007745.1-P | Field mustard | cytosol | 61.09 | 50.86 |
| CDX79419 | Canola | cytosol | 61.42 | 50.86 |
| Bra007747.1-P | Field mustard | cytosol | 60.66 | 50.5 |
| CDX93907 | Canola | cytosol | 61.09 | 50.5 |
| CDX76700 | Canola | cytosol | 60.44 | 50.36 |
| Bra003525.1-P | Field mustard | cytosol | 60.66 | 50.18 |
| CDX67919 | Canola | cytosol | 60.77 | 50.18 |
| Zm00001d011587_P001 | Maize | nucleus | 10.05 | 50.0 |
| Zm00001d037286_P001 | Maize | nucleus | 9.4 | 50.0 |
| GSMUA_AchrUn_... | Banana | extracellular | 12.9 | 49.79 |
| Zm00001d034411_P001 | Maize | nucleus | 9.29 | 49.42 |
| GSMUA_Achr3P08600_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 57.6 | 48.39 |
| KXG36842 | Sorghum | plasma membrane | 56.83 | 46.14 |
| CDY11476 | Canola | plastid | 32.79 | 45.94 |
| GSMUA_Achr8P22150_001 | Banana | cytosol | 56.5 | 45.79 |
| Os07t0657200-01 | Rice | plastid | 56.17 | 45.61 |
| Zm00001d022378_P003 | Maize | cytosol | 55.41 | 44.71 |
| AT1G18830.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 47.32 | 44.69 |
| TraesCS2A01G132900.1 | Wheat | cytosol | 54.86 | 44.23 |
| TraesCS2D01G135000.1 | Wheat | cytosol | 54.75 | 44.14 |
| TraesCS2B01G156400.3 | Wheat | golgi | 54.64 | 43.94 |
| Bra016539.1-P | Field mustard | cytosol | 43.39 | 43.53 |
| CDX96696 | Canola | cytosol | 43.93 | 42.99 |
| Zm00001d051619_P001 | Maize | peroxisome | 3.61 | 42.86 |
| CDX83811 | Canola | cytosol | 43.83 | 42.84 |
| Zm00001d015774_P001 | Maize | mitochondrion | 9.18 | 42.42 |
| Zm00001d007075_P007 | Maize | plasma membrane | 54.75 | 41.78 |
| Zm00001d019612_P001 | Maize | plastid | 17.49 | 33.61 |
| GSMUA_AchrUn_... | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 1.09 | 4.98 |
| KRH23909 | Soybean | cytosol | 0.0 | 0.0 |
| HORVU6Hr1G025750.1 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.20.940.10 | Gene3D:1.25.40.1030 | Gene3D:2.130.10.10 | MapMan:22.4.1.2 | UniProt:A0A0R0H998 | InterPro:ACE1_Sec16_Sec31 |
| EMBL:ACUP02007162 | EnsemblPlantsGene:GLYMA_12G0103001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | ProteinID:KRH23911.1 |
| EnsemblPlants:KRH23912 | ProteinID:KRH23912 | ProteinID:KRH23912.1 | PFAM:PF12931 | PFscan:PS50082 | PFscan:PS50294 |
| PANTHER:PTHR13923 | PANTHER:PTHR13923:SF11 | SMART:SM00320 | SUPFAM:SSF50978 | UniParc:UPI0006EDB87F | InterPro:WD40/YVTN_repeat-like_dom_sf |
| InterPro:WD40_repeat | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr12:+:739618..747849
Molecular Weight (calculated)
100153.0 Da
IEP (calculated)
4.917
GRAVY (calculated)
-0.396
Length
915 amino acids
Sequence
(BLAST)
(BLAST)
001: VWDLKKQKPV ISFADSVRRR CSVLQWNPDV ATQLVVASDE DSSPSLRLWD MRNTISPIKE FVGHTRGVIA MSWCPNDSSY LLTCGKDSRT ICWDMISGEI
101: AYELPAGTNW NFDVHWYPRI PGVISASSFD GKIGIYNIKG CRQNGIGEND FGAVPLRAPK WYKRPTGVSF GFGGKLVSFH PRASAAGSPA GASEVYVHNL
201: VTENGLVSRS SEFEAAIQNG ERSLLRVLCE KKTEESESEE ERETWGFLKV MLEDDGTART KLLSHLGFNV PSEAKDTVND DLSQEVNALG LEDTTVDNVG
301: HVATNETTIF STDNGEDFFN NLPSPKADTP VSTSAGNFAV VENANGSEKI QDDVEVEESS DPSFDDSVQH ALVVGDYKGA VMQCISANKW ADALVIAHVG
401: NASLWESTRD QYLKMVRSPY LKIVSAMVSN DLLSLVNTRP LKFWKETLAL LCSFAQRDEW TMLCDTLASK LMGAGNTLAA TLCYICAGNI DKTVEIWSRS
501: LSNETEGKSY VDLLQDLMEK TIVLALATGQ KRFSASLCKL VEKYAEILAS QGLLTTAMEY LKLLGSEELS PELTILKDRI ALSTEPEKDF KTTAFESSQS
601: HSGSYYGADN SNYNSNYYQE PVTTQVQHGV SGIQYPDSYQ QPFDPRYGRG YGAPTPPQQP QQPNLFVPPQ TTQVVQTPQP TFSNTAVAPP PLRTFDPQTP
701: PMLRNVEQYQ QPTLGSQLYN TTNPPYQPTP PVPSQVALSH GQNLSQVVAP TPNPMGYMPV SGSGGVQRPG VGSIQPPSPP QVQPVQPPAA PPPTLQTADT
801: SKVPGHQMPI VTTLTRLFNE TSDALGGSRA NPAKRREIED NSKRLGGLFA KLNSGDISKN ASDKLLQLCQ ALDNGDFGTA LQIQVLLTTT EWDECQSWLG
901: SLKRMIKTRQ SARLG
101: AYELPAGTNW NFDVHWYPRI PGVISASSFD GKIGIYNIKG CRQNGIGEND FGAVPLRAPK WYKRPTGVSF GFGGKLVSFH PRASAAGSPA GASEVYVHNL
201: VTENGLVSRS SEFEAAIQNG ERSLLRVLCE KKTEESESEE ERETWGFLKV MLEDDGTART KLLSHLGFNV PSEAKDTVND DLSQEVNALG LEDTTVDNVG
301: HVATNETTIF STDNGEDFFN NLPSPKADTP VSTSAGNFAV VENANGSEKI QDDVEVEESS DPSFDDSVQH ALVVGDYKGA VMQCISANKW ADALVIAHVG
401: NASLWESTRD QYLKMVRSPY LKIVSAMVSN DLLSLVNTRP LKFWKETLAL LCSFAQRDEW TMLCDTLASK LMGAGNTLAA TLCYICAGNI DKTVEIWSRS
501: LSNETEGKSY VDLLQDLMEK TIVLALATGQ KRFSASLCKL VEKYAEILAS QGLLTTAMEY LKLLGSEELS PELTILKDRI ALSTEPEKDF KTTAFESSQS
601: HSGSYYGADN SNYNSNYYQE PVTTQVQHGV SGIQYPDSYQ QPFDPRYGRG YGAPTPPQQP QQPNLFVPPQ TTQVVQTPQP TFSNTAVAPP PLRTFDPQTP
701: PMLRNVEQYQ QPTLGSQLYN TTNPPYQPTP PVPSQVALSH GQNLSQVVAP TPNPMGYMPV SGSGGVQRPG VGSIQPPSPP QVQPVQPPAA PPPTLQTADT
801: SKVPGHQMPI VTTLTRLFNE TSDALGGSRA NPAKRREIED NSKRLGGLFA KLNSGDISKN ASDKLLQLCQ ALDNGDFGTA LQIQVLLTTT EWDECQSWLG
901: SLKRMIKTRQ SARLG
0001: MACIKGVGRS ASVALAPDAP YMAAGTMAGA VDLSFSSSAN LEIFKLDFQS DDRDLPLVGE IPSSERFNRL AWGRNGSGSE EFALGLIAGG LVDGNIDLWN
0101: PLSLIGSQPS ENALVGHLSV HKGPVRGLEF NAISSNLLAS GADDGEICIW DLLKPSEPSH FPLLKGSGSA TQGEISFISW NRKVQQILAS TSYNGTTVIW
0201: DLRKQKPIIN FADSVRRRCS VLQWNPNVTT QIMVASDDDS SPTLKLWDMR NIMSPVREFT GHQRGVIAME WCPSDSSYLL TCAKDNRTIC WDTNTAEIVA
0301: ELPAGNNWNF DVHWYPKIPG VISASSFDGK IGIYNIEGCS RYGVEENNFG TAPLKAPKWY KRPVGASFGF GGKLVSCHAR APAKGTSSIL SEVFLHSLVT
0401: EQSLVSRTSE FEAAIENGDM TSLRGLCEKK SEETESEEEK ETWGLLKIMF EEEGTSRTKL ISHLGFTLPV AEKDQAVDGL SSDLNGIRLE DTAADALDLD
0501: DSNEAAAFAM DNGEDFFNNF PAKPDTPVST SAKDFMPSDT DFSTKGEETQ EMQEEEEESS DPVFDNAIQR ALIVGDYKEA VDQCITANKM ADALVIAHVG
0601: GTALWESTRE KYLKTSSAPY MKVVSAMVNN DLRSLIYTRS HKFWKETLAL LCTFAQGEQW TTLCDALASK LMAAGNTLAA VLCYICAGNV DRTVEIWSRS
0701: LANERDGRSY AELLQDLMEK TLVLALATGN KKFSASLCKL FESYAEILAS QGLLTTAMKY LKVLDSGGLS PELSILRDRI SLSAEPETNT TASGNTQPQS
0801: TMPYNQEPTQ AQPNVLANPY DNQYQQPYTD SYYVPQVSHP PMQQPTMFMP HQAQPAPQPS FTPAPTSNAQ PSMRTTFVPS TPPALKNADQ YQQPTMSSHS
0901: FTGPSNNAYP VPPGPGQYAP SGPSQLGQYP NPKMPQVVAP AAGPIGFTPM ATPGVAPRSV QPASPPTQQA AAQAAPAPAT PPPTVQTADT SNVPAHQKPV
1001: IATLTRLFNE TSEALGGARA NTTKKREIED NSRKLGALFV KLNSGDISKN AADKLAQLCQ ALDNNDFSTA LQIQVLLTTS EWDECNFWLA TLKRMMVKAR
1101: QNVR
0101: PLSLIGSQPS ENALVGHLSV HKGPVRGLEF NAISSNLLAS GADDGEICIW DLLKPSEPSH FPLLKGSGSA TQGEISFISW NRKVQQILAS TSYNGTTVIW
0201: DLRKQKPIIN FADSVRRRCS VLQWNPNVTT QIMVASDDDS SPTLKLWDMR NIMSPVREFT GHQRGVIAME WCPSDSSYLL TCAKDNRTIC WDTNTAEIVA
0301: ELPAGNNWNF DVHWYPKIPG VISASSFDGK IGIYNIEGCS RYGVEENNFG TAPLKAPKWY KRPVGASFGF GGKLVSCHAR APAKGTSSIL SEVFLHSLVT
0401: EQSLVSRTSE FEAAIENGDM TSLRGLCEKK SEETESEEEK ETWGLLKIMF EEEGTSRTKL ISHLGFTLPV AEKDQAVDGL SSDLNGIRLE DTAADALDLD
0501: DSNEAAAFAM DNGEDFFNNF PAKPDTPVST SAKDFMPSDT DFSTKGEETQ EMQEEEEESS DPVFDNAIQR ALIVGDYKEA VDQCITANKM ADALVIAHVG
0601: GTALWESTRE KYLKTSSAPY MKVVSAMVNN DLRSLIYTRS HKFWKETLAL LCTFAQGEQW TTLCDALASK LMAAGNTLAA VLCYICAGNV DRTVEIWSRS
0701: LANERDGRSY AELLQDLMEK TLVLALATGN KKFSASLCKL FESYAEILAS QGLLTTAMKY LKVLDSGGLS PELSILRDRI SLSAEPETNT TASGNTQPQS
0801: TMPYNQEPTQ AQPNVLANPY DNQYQQPYTD SYYVPQVSHP PMQQPTMFMP HQAQPAPQPS FTPAPTSNAQ PSMRTTFVPS TPPALKNADQ YQQPTMSSHS
0901: FTGPSNNAYP VPPGPGQYAP SGPSQLGQYP NPKMPQVVAP AAGPIGFTPM ATPGVAPRSV QPASPPTQQA AAQAAPAPAT PPPTVQTADT SNVPAHQKPV
1001: IATLTRLFNE TSEALGGARA NTTKKREIED NSRKLGALFV KLNSGDISKN AADKLAQLCQ ALDNNDFSTA LQIQVLLTTS EWDECNFWLA TLKRMMVKAR
1101: QNVR
Arabidopsis Description
SEC31BProtein transport protein SEC31 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q8L611]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.