Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G058340.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 90.57 | 90.57 |
| HORVU7Hr1G058330.1 | Barley | cytosol, plastid | 32.08 | 40.0 |
| KRH23909 | Soybean | cytosol | 58.49 | 34.25 |
| CDY11476 | Canola | plastid | 58.49 | 9.49 |
| AT3G63460.1 | Thale cress | cytosol | 60.38 | 5.8 |
| CDX79419 | Canola | cytosol | 59.43 | 5.7 |
| AT1G18830.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 51.89 | 5.68 |
| CDX76700 | Canola | cytosol | 58.49 | 5.65 |
| Bra003525.1-P | Field mustard | cytosol | 58.49 | 5.61 |
| CDX67919 | Canola | cytosol | 58.49 | 5.6 |
| Bra007745.1-P | Field mustard | cytosol | 57.55 | 5.55 |
| Bra007747.1-P | Field mustard | cytosol | 57.55 | 5.55 |
| KRH39898 | Soybean | nucleus | 59.43 | 5.49 |
| CDX83811 | Canola | cytosol | 48.11 | 5.45 |
| Bra016539.1-P | Field mustard | cytosol | 46.23 | 5.37 |
| CDX96696 | Canola | cytosol | 47.17 | 5.35 |
| CDX93907 | Canola | cytosol | 54.72 | 5.24 |
| Solyc01g088020.2.1 | Tomato | extracellular | 48.11 | 4.54 |
| VIT_13s0158g00140.t01 | Wine grape | cytosol | 43.4 | 4.19 |
| HORVU2Hr1G023350.3 | Barley | cytosol, plastid | 39.62 | 3.86 |
| KRH15712 | Soybean | mitochondrion, plastid | 0.0 | 0.0 |
| KRH23912 | Soybean | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G025750.1 | EnsemblPlantsGene:HORVU6Hr1G025750 | Gene3D:2.130.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015943 | InterPro:WD40/YVTN_repeat-like_dom_sf | PANTHER:PTHR13923 | PANTHER:PTHR13923:SF11 | SEG:seg | UniParc:UPI000B486BEE |
| UniProt:A0A287TMK6 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr6H:+:94730846..94731294
Molecular Weight (calculated)
11002.1 Da
IEP (calculated)
3.909
GRAVY (calculated)
0.303
Length
106 amino acids
Sequence
(BLAST)
(BLAST)
001: MACIKSAQRA VLTALAPEAP YIAADTMSGA VDMQFSASAN IEILSLDFQS DSPDLPLLAA APSPDRFNRL CWSRPGAADG DSFSLSLLAG GLSDGSIAVW
101: NPLSMI
101: NPLSMI
0001: MACIKGVGRS ASVALAPDAP YMAAGTMAGA VDLSFSSSAN LEIFKLDFQS DDRDLPLVGE IPSSERFNRL AWGRNGSGSE EFALGLIAGG LVDGNIDLWN
0101: PLSLIGSQPS ENALVGHLSV HKGPVRGLEF NAISSNLLAS GADDGEICIW DLLKPSEPSH FPLLKGSGSA TQGEISFISW NRKVQQILAS TSYNGTTVIW
0201: DLRKQKPIIN FADSVRRRCS VLQWNPNVTT QIMVASDDDS SPTLKLWDMR NIMSPVREFT GHQRGVIAME WCPSDSSYLL TCAKDNRTIC WDTNTAEIVA
0301: ELPAGNNWNF DVHWYPKIPG VISASSFDGK IGIYNIEGCS RYGVEENNFA PLKAPKWYKR PVGASFGFGG KLVSCHARAP AKGTSSILSE VFLHSLVTEQ
0401: SLVSRTSEFE AAIENGDMTS LRGLCEKKSE ETESEEEKET WGLLKIMFEE EGTSRTKLIS HLGFTLPVAE KDQAVDGLSS DLNGIRLEDT AADALDLDDS
0501: NEAAAFAMDN GEDFFNNFPA KPDTPVSTSA KDFMPSDTDF STKGEETQEM QEEEEESSDP VFDNAIQRAL IVGDYKEAVD QCITANKMAD ALVIAHVGGT
0601: ALWESTREKY LKTSSAPYMK VVSAMVNNDL RSLIYTRSHK FWKETLALLC TFAQGEQWTT LCDALASKLM AAGNTLAAVL CYICAGNVDR TVEIWSRSLA
0701: NERDGRSYAE LLQDLMEKTL VLALATGNKK FSASLCKLFE SYAEILASQG LLTTAMKYLK VLDSGGLSPE LSILRDRISL SAEPETNTTA SGNTQPQSTM
0801: PYNQEPTQAQ PNVLANPYDN QYQQPYTDSY YVPQVSHPPM QQPTMFMPHQ AQPAPQPSFT PAPTSNAQPS MRTTFVPSTP PALKNADQYQ QPTMSSHSFT
0901: GPSNNAYPVP PGPGQYAPSG PSQLGQYPNP KMPQVVAPAA GPIGFTPMAT PGVAPRSVQP ASPPTQQAAA QAAPAPATPP PTVQTADTSN VPAHQKPVIA
1001: TLTRLFNETS EALGGARANT TKKREIEDNS RKLGALFVKL NSGDISKNAA DKLAQLCQAL DNNDFSTALQ IQVLLTTSEW DECNFWLATL KRMMVKARQN
1101: VR
0101: PLSLIGSQPS ENALVGHLSV HKGPVRGLEF NAISSNLLAS GADDGEICIW DLLKPSEPSH FPLLKGSGSA TQGEISFISW NRKVQQILAS TSYNGTTVIW
0201: DLRKQKPIIN FADSVRRRCS VLQWNPNVTT QIMVASDDDS SPTLKLWDMR NIMSPVREFT GHQRGVIAME WCPSDSSYLL TCAKDNRTIC WDTNTAEIVA
0301: ELPAGNNWNF DVHWYPKIPG VISASSFDGK IGIYNIEGCS RYGVEENNFA PLKAPKWYKR PVGASFGFGG KLVSCHARAP AKGTSSILSE VFLHSLVTEQ
0401: SLVSRTSEFE AAIENGDMTS LRGLCEKKSE ETESEEEKET WGLLKIMFEE EGTSRTKLIS HLGFTLPVAE KDQAVDGLSS DLNGIRLEDT AADALDLDDS
0501: NEAAAFAMDN GEDFFNNFPA KPDTPVSTSA KDFMPSDTDF STKGEETQEM QEEEEESSDP VFDNAIQRAL IVGDYKEAVD QCITANKMAD ALVIAHVGGT
0601: ALWESTREKY LKTSSAPYMK VVSAMVNNDL RSLIYTRSHK FWKETLALLC TFAQGEQWTT LCDALASKLM AAGNTLAAVL CYICAGNVDR TVEIWSRSLA
0701: NERDGRSYAE LLQDLMEKTL VLALATGNKK FSASLCKLFE SYAEILASQG LLTTAMKYLK VLDSGGLSPE LSILRDRISL SAEPETNTTA SGNTQPQSTM
0801: PYNQEPTQAQ PNVLANPYDN QYQQPYTDSY YVPQVSHPPM QQPTMFMPHQ AQPAPQPSFT PAPTSNAQPS MRTTFVPSTP PALKNADQYQ QPTMSSHSFT
0901: GPSNNAYPVP PGPGQYAPSG PSQLGQYPNP KMPQVVAPAA GPIGFTPMAT PGVAPRSVQP ASPPTQQAAA QAAPAPATPP PTVQTADTSN VPAHQKPVIA
1001: TLTRLFNETS EALGGARANT TKKREIEDNS RKLGALFVKL NSGDISKNAA DKLAQLCQAL DNNDFSTALQ IQVLLTTSEW DECNFWLATL KRMMVKARQN
1101: VR
Arabidopsis Description
SEC31BProtein transport protein SEC31 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q8L611]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.