CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67919	Canola	cytosol	97.29	97.02
CDY11476	Canola	plastid	52.49	88.82
CDX93907	Canola	cytosol	88.51	88.35
CDX76700	Canola	cytosol	86.88	87.43
AT3G63460.1	Thale cress	cytosol	86.97	87.05
KRH23909	Soybean	cytosol	12.76	77.9
VIT_13s0158g00140.t01	Wine grape	cytosol	64.16	64.51
CDX96696	Canola	cytosol	52.94	62.57
KRH39898	Soybean	nucleus	64.52	62.11
CDX83811	Canola	cytosol	52.58	62.07
Solyc01g088020.2.1	Tomato	extracellular	62.9	61.83
KRH23912	Soybean	cytosol	50.86	61.42
GSMUA_AchrUn_...	Banana	extracellular	13.03	60.76
GSMUA_AchrUn_...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	10.95	60.2
HORVU6Hr1G025750.1	Barley	cytosol	5.7	59.43
GSMUA_Achr3P08600_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	56.11	56.93
GSMUA_Achr8P22150_001	Banana	cytosol	55.84	54.65
KRH15712	Soybean	mitochondrion, plastid	8.69	54.55
KXG36842	Sorghum	plasma membrane	55.48	54.39
Zm00001d022378_P003	Maize	cytosol	55.48	54.06
Os07t0657200-01	Rice	plastid	54.66	53.59
TraesCS2D01G135000.1	Wheat	cytosol	53.21	51.81
TraesCS2A01G132900.1	Wheat	cytosol	53.12	51.72
TraesCS2B01G156400.3	Wheat	golgi	53.03	51.49
Zm00001d007075_P007	Maize	plasma membrane	54.84	50.54
GSMUA_AchrUn_...	Banana	mitochondrion	36.02	49.32
Zm00001d034411_P001	Maize	nucleus	6.88	44.19
Zm00001d037286_P001	Maize	nucleus	6.88	44.19
Zm00001d011587_P001	Maize	nucleus	7.33	44.02
Zm00001d015774_P001	Maize	mitochondrion	7.42	41.41
Zm00001d051619_P001	Maize	peroxisome	2.53	36.36
Zm00001d019612_P001	Maize	plastid	15.29	35.5

Protein Annotations

Gene3D:1.20.940.10	Gene3D:1.25.40.1030	Gene3D:2.130.10.10	MapMan:22.4.1.2	InterPro:ACE1_Sec16_Sec31	EnsemblPlants:CDX79419
ProteinID:CDX79419	ProteinID:CDX79419.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00132142001
InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	PFAM:PF00400	PFAM:PF12931	ScanProsite:PS00678
PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR13923	PANTHER:PTHR13923:SF11	SMART:SM00320	SUPFAM:SSF50978
UniParc:UPI0004EE8C88	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf
SEG:seg	:	:	:	:	:

Description

BnaC06g18840D

Coordinates

chrLK031817:+:2105236..2111603

Molecular Weight (calculated)

119533.0 Da

IEP (calculated)

4.735

GRAVY (calculated)

-0.333

Length

1105 amino acids

Sequence
(BLAST)

0001: MACIKGVDRS ASVALAPDAP YIAAGTMAGA VDLSFSSSAS LEIFKLDFQS DDRDLPLVGE IPCSERFHRL AWGRNGSGSD EFSLGLIAGG LGDGNIDLWN
0101: PLSLTSSQSG VNALVGHLSV HKGPVRGLEF NAITPNLLAS GADDGEICIW DLTKPSEPSH FPLLKGSGSS TQGEISFISW NRKVQQILAS TSYNGTTVIW
0201: DLRKQKPLIN FADSVRRRCS VLQWNPDIAT QIMVASDDDS SPTLKLWDMR NTMSPVREFT GHQKGVIAME WCPNDSSYLL TCAKDNRTIC WDTNTGEIVA
0301: ELPAGNNWNF DVHWYPKIPG VISASSFDGK IGIYNIEGCS RYGAEDNTFG TAYLKAPKWY KRPVGASFGF GGKLVSFQSK APPKGASCIT SEVFLHSLVT
0401: EQSLVSRTSE FEAAIENGDK TSLRGLCEKK SEETESEEEK ETWGLLKMMF DEEGTTRTKL ISHLGFSLPS VEQDQAVNGL SSDLNGVELE DTAVHAREPE
0501: ESNEAAAFAM DNGEDFFNNF PAKPDTPVST SATDFMPPDT DFTAKEEETE EMPEEEDESS DRVFDDAIQR ALVVGDYKEA VDQCISANKM ADALVIAHVG
0601: GTALWESTRE KYLKMSSAPF MKVVSAMVNN DLTSLVHTRS HKYWKETLAL LCTFAQGEQW SSLCDVLASK LMAAGNTLAA VLCYICAGNV DRTVEIWSRS
0701: LSNERDGRSY AELLQDLMEK TLVLALATGN KKFSASLCKL FESYAEILAS QGLLSTAMKY LKVLDSGGLS PELSILRDRI SLSAEPETST VASGNTQLPS
0801: TIPYNQEPTQ AQPNVLSNPY DNQYQQPYTN SYGGYGPTAV NPPMQQATMF MPHQAQPTPQ PSYPPAPASN AQQSMRSTFV PSTPAALKNA NQYQQPTIAS
0901: HSFTGPSNNA YPVPPGPGSY VPSAPSQVGQ YSNPMMSQVA APGAGPVGFT PMSTPGVAPR SVIGSVQPAS PPAPQAAPAP AAPPPTVQTA DTSNVPAHQK
1001: PVVATLTRLF NETSEALGGA RANPPKKREI EDNSKKLGAL FVKLNSGEMA KSAADKLGQL CQALDNHDFS TALQIQVLLT NSEWDECNFW LSALKRMIKT
1101: RQNVR

Best Arabidopsis Sequence Match ( AT3G63460.1 )
(BLAST)

0001: MACIKGVGRS ASVALAPDAP YMAAGTMAGA VDLSFSSSAN LEIFKLDFQS DDRDLPLVGE IPSSERFNRL AWGRNGSGSE EFALGLIAGG LVDGNIDLWN
0101: PLSLIGSQPS ENALVGHLSV HKGPVRGLEF NAISSNLLAS GADDGEICIW DLLKPSEPSH FPLLKGSGSA TQGEISFISW NRKVQQILAS TSYNGTTVIW
0201: DLRKQKPIIN FADSVRRRCS VLQWNPNVTT QIMVASDDDS SPTLKLWDMR NIMSPVREFT GHQRGVIAME WCPSDSSYLL TCAKDNRTIC WDTNTAEIVA
0301: ELPAGNNWNF DVHWYPKIPG VISASSFDGK IGIYNIEGCS RYGVEENNFG TAPLKAPKWY KRPVGASFGF GGKLVSCHAR APAKGTSSIL SEVFLHSLVT
0401: EQSLVSRTSE FEAAIENGDM TSLRGLCEKK SEETESEEEK ETWGLLKIMF EEEGTSRTKL ISHLGFTLPV AEKDQAVDGL SSDLNGIRLE DTAADALDLD
0501: DSNEAAAFAM DNGEDFFNNF PAKPDTPVST SAKDFMPSDT DFSTKGEETQ EMQEEEEESS DPVFDNAIQR ALIVGDYKEA VDQCITANKM ADALVIAHVG
0601: GTALWESTRE KYLKTSSAPY MKVVSAMVNN DLRSLIYTRS HKFWKETLAL LCTFAQGEQW TTLCDALASK LMAAGNTLAA VLCYICAGNV DRTVEIWSRS
0701: LANERDGRSY AELLQDLMEK TLVLALATGN KKFSASLCKL FESYAEILAS QGLLTTAMKY LKVLDSGGLS PELSILRDRI SLSAEPETNT TASGNTQPQS
0801: TMPYNQEPTQ AQPNVLANPY DNQYQQPYTD SYYVPQVSHP PMQQPTMFMP HQAQPAPQPS FTPAPTSNAQ PSMRTTFVPS TPPALKNADQ YQQPTMSSHS
0901: FTGPSNNAYP VPPGPGQYAP SGPSQLGQYP NPKMPQVVAP AAGPIGFTPM ATPGVAPRSV QPASPPTQQA AAQAAPAPAT PPPTVQTADT SNVPAHQKPV
1001: IATLTRLFNE TSEALGGARA NTTKKREIED NSRKLGALFV KLNSGDISKN AADKLAQLCQ ALDNNDFSTA LQIQVLLTTS EWDECNFWLA TLKRMMVKAR
1101: QNVR

Arabidopsis Description

SEC31BProtein transport protein SEC31 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q8L611]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.