CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH23909	Soybean	cytosol	22.51	81.22
GSMUA_AchrUn_...	Banana	extracellular	21.59	59.49
Bra007745.1-P	Field mustard	cytosol	98.47	58.51
HORVU6Hr1G025750.1	Barley	cytosol	9.49	58.49
GSMUA_AchrUn_...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	17.92	58.21
Bra007747.1-P	Field mustard	cytosol	97.24	57.78
CDX76700	Canola	cytosol	95.41	56.74
CDX93907	Canola	cytosol	89.13	52.57
AT3G63460.1	Thale cress	cytosol	88.82	52.54
CDX79419	Canola	cytosol	88.82	52.49
CDX67919	Canola	cytosol	88.21	51.99
Zm00001d011587_P001	Maize	nucleus	12.4	44.02
Zm00001d037286_P001	Maize	nucleus	11.49	43.6
Zm00001d034411_P001	Maize	nucleus	11.49	43.6
CDX96696	Canola	cytosol	58.81	41.07
CDX83811	Canola	cytosol	58.35	40.71
KRH39898	Soybean	nucleus	70.44	40.07
VIT_13s0158g00140.t01	Wine grape	cytosol	67.23	39.95
Solyc01g088020.2.1	Tomato	extracellular	66.31	38.52
GSMUA_Achr3P08600_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	59.26	35.54
Zm00001d015774_P001	Maize	mitochondrion	10.72	35.35
Zm00001d051619_P001	Maize	peroxisome	4.13	35.06
GSMUA_Achr8P22150_001	Banana	cytosol	59.88	34.63
Zm00001d019612_P001	Maize	plastid	24.96	34.24
KXG36842	Sorghum	plasma membrane	57.58	33.36
Zm00001d022378_P003	Maize	cytosol	57.73	33.25
KRH23912	Soybean	cytosol	45.94	32.79
Os07t0657200-01	Rice	plastid	56.05	32.48
TraesCS2D01G135000.1	Wheat	cytosol	55.13	31.72
TraesCS2A01G132900.1	Wheat	cytosol	54.98	31.63
TraesCS2B01G156400.3	Wheat	golgi	54.67	31.37
Zm00001d007075_P007	Maize	plasma membrane	56.97	31.03
KRH15712	Soybean	mitochondrion, plastid	5.51	20.45
GSMUA_AchrUn_...	Banana	mitochondrion	24.35	19.7

Protein Annotations

Gene3D:1.25.40.1030	Gene3D:2.130.10.10	MapMan:22.4.1.2	UniProt:A0A078FDU1	EnsemblPlants:CDY11476	ProteinID:CDY11476
ProteinID:CDY11476.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00049548001	InterPro:IPR001680
InterPro:IPR015943	InterPro:IPR017986	PFAM:PF00400	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294
PANTHER:PTHR13923	PANTHER:PTHR13923:SF11	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI0004EE2DAB	InterPro:WD40/YVTN_repeat-like_dom_sf
InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg	:

Description

BnaA09g40420DBnaA09g40420D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FDU1]

Coordinates

chrLK032011:-:591092..594499

Molecular Weight (calculated)

71002.3 Da

IEP (calculated)

4.561

GRAVY (calculated)

-0.264

Length

653 amino acids

Sequence
(BLAST)

001: MACIKGVGRS ASVALAPDAP YMAAGTMAGA VDLSFSSSAN LEIFKLDFQS DERDLTLVGE IPSSERFHRL AWGKNGSGSE EFSLGLIAGG LVDGNIDLWN
101: PLSLISSESA LVGHLSVHKG PVRGLEFNAI APNLLASGAD DGEICIWDLT KPSEPSHFPL LKGSGSATQG EISFISWNRK VQQILASTSY NGTTAIWDLR
201: KQKPIINFAD SVRRRCSVLQ WNPDIATQIM VASDDDSSPT LKLWDMRNTM SPVREFTGHQ KGVIAMEWCP SDSSYLLTCA KDNRTICWDT NTAEIVAELP
301: AGNNWNFDVH WYPKIPGVIS ASSFDGKIGI YNIEGCSRYG AEGNSFGTAP LRAPKWYKRP VGASFGFGGK LVSFHAKPPP KGASSIPSEV FLHSLVTEQS
401: LVSRTSEFET AIENGDKTSL RGLCEKKSEE TESEEEKETW SLLKIMFEEE GTTRTKLISH LGFSLPSVEK DHAVDALSSD LNGIGLEDTA PEPVKINEAA
501: AFAMDNGEDF FDNFPSKPDT PVSTSSKDFM PPDTDSSAKV EETREIPEEE EEGSDKVFDD AIQSALVVGN YNEAVDQCIS ANKMADALVI AHVGGTSLWE
601: STREKYLKTS GAPYMKIVSA MVNNDLTSLI YTRSLKFWKE TLALLCTVSL SNS

Best Arabidopsis Sequence Match ( AT3G63460.1 )
(BLAST)

0001: MACIKGVGRS ASVALAPDAP YMAAGTMAGA VDLSFSSSAN LEIFKLDFQS DDRDLPLVGE IPSSERFNRL AWGRNGSGSE EFALGLIAGG LVDGNIDLWN
0101: PLSLIGSQPS ENALVGHLSV HKGPVRGLEF NAISSNLLAS GADDGEICIW DLLKPSEPSH FPLLKGSGSA TQGEISFISW NRKVQQILAS TSYNGTTVIW
0201: DLRKQKPIIN FADSVRRRCS VLQWNPNVTT QIMVASDDDS SPTLKLWDMR NIMSPVREFT GHQRGVIAME WCPSDSSYLL TCAKDNRTIC WDTNTAEIVA
0301: ELPAGNNWNF DVHWYPKIPG VISASSFDGK IGIYNIEGCS RYGVEENNFG TAPLKAPKWY KRPVGASFGF GGKLVSCHAR APAKGTSSIL SEVFLHSLVT
0401: EQSLVSRTSE FEAAIENGDM TSLRGLCEKK SEETESEEEK ETWGLLKIMF EEEGTSRTKL ISHLGFTLPV AEKDQAVDGL SSDLNGIRLE DTAADALDLD
0501: DSNEAAAFAM DNGEDFFNNF PAKPDTPVST SAKDFMPSDT DFSTKGEETQ EMQEEEEESS DPVFDNAIQR ALIVGDYKEA VDQCITANKM ADALVIAHVG
0601: GTALWESTRE KYLKTSSAPY MKVVSAMVNN DLRSLIYTRS HKFWKETLAL LCTFAQGEQW TTLCDALASK LMAAGNTLAA VLCYICAGNV DRTVEIWSRS
0701: LANERDGRSY AELLQDLMEK TLVLALATGN KKFSASLCKL FESYAEILAS QGLLTTAMKY LKVLDSGGLS PELSILRDRI SLSAEPETNT TASGNTQPQS
0801: TMPYNQEPTQ AQPNVLANPY DNQYQQPYTD SYYVPQVSHP PMQQPTMFMP HQAQPAPQPS FTPAPTSNAQ PSMRTTFVPS TPPALKNADQ YQQPTMSSHS
0901: FTGPSNNAYP VPPGPGQYAP SGPSQLGQYP NPKMPQVVAP AAGPIGFTPM ATPGVAPRSV QPASPPTQQA AAQAAPAPAT PPPTVQTADT SNVPAHQKPV
1001: IATLTRLFNE TSEALGGARA NTTKKREIED NSRKLGALFV KLNSGDISKN AADKLAQLCQ ALDNNDFSTA LQIQVLLTTS EWDECNFWLA TLKRMMVKAR
1101: QNVR

Arabidopsis Description

SEC31BProtein transport protein SEC31 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q8L611]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.