Factsheet for Os02t0819700-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0611450-00
Os02t0708400-01
Os02t0774300-01
Os03t0100200-01
Os03t0113700-01
Os04t0406600-01
Os04t0499200-01
Os07t0657200-01
Os09t0565700-01
Os09t0566050-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G54826.1	Os02t0708400-01	AT3G27960.1	21798944
AT3G54826.1	Os07t0657200-01	AT3G63460.1	21798944
AT3G54826.1	Os02t0774300-01	AT5G09590.1	22841711
AT3G54826.1	Os03t0113700-01	AT5G09590.1	22841711
AT3G54826.1	Os02t0611450-00	AT5G10810.1	21798944
AT3G54826.1	Os04t0499200-01	AT5G10810.1	21798944
AT3G54826.1	Os04t0406600-01	AT5G22630.1	21798944
AT3G54826.1	Os09t0565700-01	AT5G22630.1	21798944
AT3G54826.1	Os09t0566050-00	AT5G22630.1	21798944
AT3G54826.1	Os03t0100200-01	AT5G51110.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G435000.1	Wheat	mitochondrion	69.68	67.88
TraesCS6D01G380400.1	Wheat	mitochondrion	69.15	65.0
Zm00001d018501_P001	Maize	mitochondrion	62.77	63.1
HORVU6Hr1G091500.1	Barley	mitochondrion	69.15	54.85
TraesCS6A01G395100.1	Wheat	plastid	68.09	53.11
EES07768	Sorghum	mitochondrion	65.96	51.67
GSMUA_Achr4P04340_001	Banana	mitochondrion	50.0	50.0
VIT_13s0019g04580.t01	Wine grape	mitochondrion	48.4	47.4
KRH34848	Soybean	mitochondrion	45.21	45.21
Bra003197.1-P	Field mustard	mitochondrion	45.21	45.21
CDY07518	Canola	mitochondrion	45.21	44.97
CDX67612	Canola	mitochondrion	45.21	44.97
KRG91929	Soybean	mitochondrion	44.68	44.44
Bra007101.1-P	Field mustard	mitochondrion	45.21	43.37
PGSC0003DMT400069831	Potato	mitochondrion	44.68	41.38
Solyc05g053250.2.1	Tomato	mitochondrion	43.62	40.39
AT3G54826.1	Thale cress	mitochondrion, plastid	47.34	39.91
CDX73445	Canola	plastid	47.34	38.53
CDX78266	Canola	plastid	45.74	37.23

Protein Annotations

MapMan:35.2	EntrezGene:4331164	EMBL:AK067374	EMBL:AK099160	ProteinID:BAD22971.1	ProteinID:BAD23100.1
ProteinID:BAF10451.1	ProteinID:BAS81614.1	ProteinID:EAZ25102.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006457
GO:GO:0006810	GO:GO:0008150	GO:GO:0008270	GO:GO:0009987	GO:GO:0016043	GO:GO:0030150
GO:GO:0046872	GO:GO:0050821	GO:GO:0051087	InterPro:IPR007853	InterPro:Mt_import_TIM15	EnsemblPlantsGene:Os02g0819700
EnsemblPlants:Os02t0819700-01	PFAM:PF05180	PFscan:PS51501	PANTHER:PTHR20922	PANTHER:PTHR20922:SF13	UniProt:Q6K719
UniParc:UPI00003B04CD	RefSeq:XP_015623667.1	InterPro:Znf_DNL-typ	:	:	:

Description

Zinc finger, Zim17-type family protein. (Os02t0819700-01);Zinc finger, Zim17-type family protein. (Os02t0819700-02)

Coordinates

chr2:-:35199419..35200921

Molecular Weight (calculated)

20332.0 Da

IEP (calculated)

5.834

GRAVY (calculated)

-0.426

Length

188 amino acids

Sequence
(BLAST)

001: MATRFLPLVR RGLAGVLNQS PAPASTRGFL FPAPVTAGIR SLQTIMEASN NASDDRNQDI EDSKTDTVPA TVPSSDSGFK VRDTSNLKIS PRHDLAMIFT
101: CKVCETRSMK MASKESYEKG VVVARCGGCN NFHLIADRLG WFGEPGSIED FLAEQGEEVK KGSTDTLNFT LEDLVGSQAN DKGPSDKK

Best Arabidopsis Sequence Match ( AT3G54826.1 )
(BLAST)

001: MIKKASFIVL RFQNFTENRS VEFLLSLRLS MAARLLALRR ALSLFSNQQH RFPLSQVSTE QLSLSNSLFS RSHVYGRLFQ RQLSVIREAN EASVTNVCNS
101: SNSATESAKV PSPATPSEEM MVKYKSQLKI NPRHDFMMVF TCKVCDTRSM KMASRESYEN GVVVVRCGGC DNLHLIADRR GWFGEPGSVE DFLASQGEEF
201: KKGSMDSLNL TPEDLAGGKI STE

Arabidopsis Description

Zim17-type zinc finger protein [Source:UniProtKB/TrEMBL;Acc:F4JE34]
SUBAcon: [plastid,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.