Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os02t0611450-00 | |
| Os02t0672700-01 | |
| Os04t0499200-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G10810.1 | Os02t0672700-01 | AT4G07950.1 | 21798944 |
| AT5G10810.1 | Os02t0611450-00 | AT5G10810.1 | 21798944 |
| AT5G10810.1 | Os04t0499200-01 | AT5G10810.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0611450-00 | Rice | extracellular | 35.45 | 65.0 |
| EES12451 | Sorghum | mitochondrion | 57.27 | 61.16 |
| Zm00001d003148_P002 | Maize | mitochondrion | 52.73 | 59.79 |
| GSMUA_Achr4P05940_001 | Banana | cytosol | 50.0 | 58.51 |
| GSMUA_Achr4P12740_001 | Banana | cytosol | 49.09 | 57.45 |
| TraesCS2A01G355000.1 | Wheat | cytosol | 53.64 | 57.28 |
| KRH15632 | Soybean | mitochondrion | 48.18 | 51.96 |
| KRH05385 | Soybean | mitochondrion | 47.27 | 50.98 |
| PGSC0003DMT400067603 | Potato | mitochondrion | 48.18 | 50.96 |
| KRH61646 | Soybean | mitochondrion | 46.36 | 50.0 |
| AT5G10810.1 | Thale cress | cytosol | 49.09 | 49.54 |
| Solyc08g006700.2.1 | Tomato | cytosol, mitochondrion | 30.91 | 46.58 |
| CDY40120 | Canola | cytosol | 48.18 | 45.3 |
| KRH52310 | Soybean | mitochondrion | 32.73 | 42.35 |
| VIT_04s0008g06800.t01 | Wine grape | plastid | 47.27 | 37.96 |
| CDX97062 | Canola | cytosol, plastid | 47.27 | 37.68 |
| HORVU2Hr1G086230.3 | Barley | mitochondrion | 54.55 | 36.81 |
| TraesCS2B01G373500.1 | Wheat | plastid | 55.45 | 27.48 |
Protein Annotations
| Gene3D:3.30.2260.10 | MapMan:35.1 | ProteinID:BAF15132.2 | ProteinID:BAS89919.1 | InterPro:EHR_sf | InterPro:Enh_rudimentary |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006221 |
| GO:GO:0007049 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045747 | InterPro:IPR035912 | EnsemblPlantsGene:Os04g0499200 | EnsemblPlants:Os04t0499200-01 | PFAM:PD008105 |
| PFAM:PF01133 | PANTHER:PTHR12373 | PANTHER:PTHR12373:SF6 | UniProt:Q0JC05 | SUPFAM:SSF143875 | SignalP:SignalP-noTM |
| UniParc:UPI0001B662F7 | : | : | : | : | : |
Description
Enhancer of rudimentary family protein. (Os04t0499200-01)
Coordinates
chr4:-:24943121..24945222
Molecular Weight (calculated)
12829.7 Da
IEP (calculated)
6.748
GRAVY (calculated)
0.045
Length
110 amino acids
Sequence
(BLAST)
(BLAST)
001: SCPGQALRAL PCFLIHFLCL YVCSSLEELG TYSLLYGMTG ICGLYERKIR DINPMARDLT YDINDLYNFI DGLTDISALV FDRSLHAFLP YDRRWIKQEM
101: FQHLKRLAQQ
101: FQHLKRLAQQ
001: MANHNSSRHT IILLQNSPSR ATRTFMDYDS IGQAMDGICG LYERKLKEIN PSLRNISYDI ADLYNFIDGL ADLSALVYDH SISAYLPYDR QWIKQKAFHH
101: LKRIANGGR
101: LKRIANGGR
Arabidopsis Description
ATEREnhancer of rudimentary homolog [Source:UniProtKB/Swiss-Prot;Acc:Q96319]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.