Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY40120 | Canola | cytosol | 85.32 | 79.49 |
| GSMUA_Achr4P05940_001 | Banana | cytosol | 67.89 | 78.72 |
| GSMUA_Achr4P12740_001 | Banana | cytosol | 66.97 | 77.66 |
| Solyc08g006700.2.1 | Tomato | cytosol, mitochondrion | 50.46 | 75.34 |
| KRH15632 | Soybean | mitochondrion | 69.72 | 74.51 |
| KRH05385 | Soybean | mitochondrion | 69.72 | 74.51 |
| PGSC0003DMT400067603 | Potato | mitochondrion | 70.64 | 74.04 |
| Zm00001d051061_P001 | Maize | cytosol, mitochondrion | 67.89 | 71.84 |
| KRH61646 | Soybean | mitochondrion | 66.97 | 71.57 |
| EES07137 | Sorghum | cytosol, mitochondrion | 66.97 | 70.87 |
| HORVU6Hr1G056200.1 | Barley | mitochondrion | 66.06 | 69.9 |
| TraesCS6A01G219900.1 | Wheat | mitochondrion | 66.06 | 69.9 |
| TraesCS6B01G249300.1 | Wheat | mitochondrion | 66.06 | 69.9 |
| TraesCS6D01G202800.1 | Wheat | mitochondrion | 66.06 | 69.9 |
| KRH52310 | Soybean | mitochondrion | 53.21 | 68.24 |
| EES12451 | Sorghum | mitochondrion | 64.22 | 67.96 |
| Zm00001d003148_P002 | Maize | mitochondrion | 59.63 | 67.01 |
| CDX97062 | Canola | cytosol, plastid | 84.4 | 66.67 |
| TraesCS2A01G355000.1 | Wheat | cytosol | 61.47 | 65.05 |
| Os02t0611450-00 | Rice | extracellular | 33.03 | 60.0 |
| VIT_04s0008g06800.t01 | Wine grape | plastid | 70.64 | 56.2 |
| Os04t0499200-01 | Rice | extracellular | 49.54 | 49.09 |
| HORVU2Hr1G086230.3 | Barley | mitochondrion | 62.39 | 41.72 |
| TraesCS2B01G373500.1 | Wheat | plastid | 61.47 | 30.18 |
Protein Annotations
| Gene3D:3.30.2260.10 | MapMan:35.1 | EntrezGene:830948 | UniProt:A0A178UA53 | ProteinID:AED91599.1 | EMBL:AK117573 |
| ArrayExpress:AT5G10810 | EnsemblPlantsGene:AT5G10810 | RefSeq:AT5G10810 | TAIR:AT5G10810 | RefSeq:AT5G10810-TAIR-G | EnsemblPlants:AT5G10810.1 |
| TAIR:AT5G10810.1 | Symbol:ATER | EMBL:BT005033 | ProteinID:CAB96836.1 | InterPro:EHR_sf | InterPro:Enh_rudimentary |
| GO:GO:0006139 | GO:GO:0006221 | GO:GO:0007049 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045747 | InterPro:IPR035912 | RefSeq:NP_568240.1 |
| ProteinID:OAO90540.1 | PFAM:PD008105 | PFAM:PF01133 | PIRSF:PIRSF016393 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS01290 | PANTHER:PTHR12373 |
| PANTHER:PTHR12373:SF0 | UniProt:Q541Y0 | UniProt:Q96319 | SUPFAM:SSF143875 | EMBL:U67398 | UniParc:UPI00000041F1 |
Description
ATEREnhancer of rudimentary homolog [Source:UniProtKB/Swiss-Prot;Acc:Q96319]
Coordinates
chr5:-:3418610..3420692
Molecular Weight (calculated)
12502.9 Da
IEP (calculated)
8.975
GRAVY (calculated)
-0.436
Length
109 amino acids
Sequence
(BLAST)
(BLAST)
001: MANHNSSRHT IILLQNSPSR ATRTFMDYDS IGQAMDGICG LYERKLKEIN PSLRNISYDI ADLYNFIDGL ADLSALVYDH SISAYLPYDR QWIKQKAFHH
101: LKRIANGGR
101: LKRIANGGR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.