Factsheet for Os09t0566050-00

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 2
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0819700-01
Os04t0101800-01
Os04t0406600-01
Os09t0565700-01
Os09t0566050-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G44720.1	Os04t0406600-01	AT3G44720.1	21798944
AT3G44720.1	Os09t0565700-01	AT3G44720.1	21798944
AT3G44720.1	Os09t0566050-00	AT3G44720.1	21798944
AT3G44720.1	Os02t0819700-01	AT3G54826.1	21798944
AT3G44720.1	Os04t0101800-01	AT5G65683.1	21798944
AT5G22630.1	Os04t0406600-01	AT3G44720.1	21798944
AT5G22630.1	Os09t0565700-01	AT3G44720.1	21798944
AT5G22630.1	Os09t0566050-00	AT3G44720.1	21798944
AT5G22630.1	Os04t0406600-01	AT5G22630.1	21798944
AT5G22630.1	Os09t0565700-01	AT5G22630.1	21798944
AT5G22630.1	Os09t0566050-00	AT5G22630.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os09t0565700-01	Rice	plastid	92.87	94.26
Zm00001d005351_P001	Maize	plastid	82.06	79.15
EER96348	Sorghum	plastid	83.29	77.4
TraesCS5A01G370200.1	Wheat	plastid	78.62	75.83
TraesCS5B01G372500.1	Wheat	plastid	78.13	75.71
TraesCS5D01G379700.1	Wheat	plastid	78.62	75.65
HORVU5Hr1G092190.1	Barley	plastid	78.62	75.12
VIT_06s0061g01300.t01	Wine grape	mitochondrion, plastid	73.22	72.51
Os04t0406600-01	Rice	plastid	76.41	71.33
KRH26581	Soybean	plastid	73.71	70.59
CDY06307	Canola	cytosol	67.81	70.05
KRH22725	Soybean	plastid	72.73	69.81
Bra031620.1-P	Field mustard	cytosol	67.32	69.54
Bra034372.1-P	Field mustard	plastid	71.25	69.38
CDY30526	Canola	plastid	71.25	69.38
Solyc11g066890.1.1	Tomato	plastid	72.24	68.85
AT1G08250.1	Thale cress	plastid	69.53	68.52
Solyc06g074530.1.1	Tomato	plastid	72.73	68.36
PGSC0003DMT400018339	Potato	plastid	72.48	68.13
CDX77139	Canola	plastid	71.25	68.08
PGSC0003DMT400068261	Potato	plastid	71.99	67.67
CDY22691	Canola	cytosol	69.29	67.46
AT2G27820.1	Thale cress	plastid	70.27	67.45
KRH25168	Soybean	plastid	70.52	67.06
KRH30513	Soybean	plastid	70.52	67.06
AT5G22630.1	Thale cress	plastid	68.3	65.41
CDY09152	Canola	plastid	67.81	64.94
AT3G44720.1	Thale cress	plastid	67.57	64.86
CDX92343	Canola	plastid	67.57	64.71
CDY59281	Canola	plastid	67.32	64.47
CDY26946	Canola	plastid	67.32	64.47
CDY72678	Canola	plastid	66.34	64.44
Bra031619.1-P	Field mustard	plastid	65.85	63.96
Bra020203.1-P	Field mustard	plastid	67.81	63.89
Bra002423.1-P	Field mustard	plastid	67.81	63.89
CDY22692	Canola	plastid	65.6	63.72
Bra019468.1-P	Field mustard	plastid	59.95	63.21
CDY30932	Canola	plastid	59.21	62.44
CDX77841	Canola	plastid	58.97	62.02
Os07t0694600-01	Rice	plastid	49.14	54.95
Os03t0286200-01	Rice	plastid	51.35	52.38
Os10t0523700-01	Rice	plastid	36.85	36.76
Os07t0512000-01	Rice	mitochondrion	25.31	33.23

Protein Annotations

KEGG:00400+4.2.1.51	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	EntrezGene:4347877	InterPro:ACT_dom
ProteinID:BAD46239.1	ProteinID:BAD46661.1	ProteinID:BAT09460.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004664
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152
GO:GO:0008652	GO:GO:0009058	GO:GO:0009073	GO:GO:0009094	GO:GO:0009507	GO:GO:0009536
GO:GO:0009570	GO:GO:0009987	GO:GO:0016829	GO:GO:0047769	InterPro:IPR001086	InterPro:IPR002912
EnsemblPlantsGene:Os09g0566050	EnsemblPlants:Os09t0566050-00	PFAM:PF00800	ScanProsite:PS00857	ScanProsite:PS00858	PFscan:PS51171
PFscan:PS51671	PANTHER:PTHR21022	PANTHER:PTHR21022:SF14	InterPro:Preph_deHydtase	InterPro:Preph_deHydtase_CS	UniProt:Q650V6
SUPFAM:SSF53850	SUPFAM:SSF55021	UniParc:UPI000043A522	RefSeq:XP_015611606.1	SEG:seg	:

Description

Similar to Prephenate dehydratase. (Os09t0566050-00)

Coordinates

chr9:+:22564044..22565353

Molecular Weight (calculated)

44285.8 Da

IEP (calculated)

6.626

GRAVY (calculated)

-0.066

Length

407 amino acids

Sequence
(BLAST)

001: MMETLPAPRP TQIPRSTAIR PPCATPFSRA HWQTTCAAIL ATTTTTNAKA YGAPRVNGDS IKPALSDHAA PPLDLDLLPV SNLPRPLTIT DLSPAPMHGS
101: QLRVAYQGVP GAYSEAAAAK AYPSCDAIPC DQFEVAFQAV ELWIADRAVL PVENSLGGSI HRNYDLLLRH RLHIVGEVQL PVHHCLLALP GVRRDLLTRV
201: ISHPQALAQC ELTLNAMGLN VAREAFDDTA AAAEHVAAAG LRDTAAIASS RAAELYGLQV LADGIQDDAG NVTRFVMLAR EPIIPRTDRP FKTSIVFAHD
301: REGTSVLFKV LSAFAFRDIS LTKIESRPHR HRPIRLVDDA NVGTAKHFEY MFYIDFQASM AEVRAQNALS EIQEFTSFLR VLGSYPMDMT PWEYSSSGQT
401: AGDTSSS

Best Arabidopsis Sequence Match ( AT1G08250.1 )
(BLAST)

001: MKALSSSSPI LGASQPATAT ALIARSGRSE WQSSCAILTS KVISQEESES LPVPPVSGGV DHLNGHNSAA ARVPGMNLVP IEKSDSNPLV PQHRHNPLKP
101: LSMTDLSPAP MHGSNLRVAY QGVPGAYSEA AAGKAYPNCQ AIPCDQFEVA FQAVELWIAD RAVLPVENSL GGSIHRNYDL LLRHRLHIVG EVQLPVHHCL
201: LALPGVRKEF LTRVISHPQG LAQCEHTLTK LGLNVAREAV DDTAGAAEFI ASNNLRDTAA IASARAAEIY GLEILEDGIQ DDVSNVTRFV MLAREPIIPR
301: TDRPFKTSIV FAHEKGTSVL FKVLSAFAFR DISLTKIESR PNHNRPIRVV DDANVGTAKH FEYMFYVDFE ASMAEARAQN ALAEVQEFTS FLRVLGSYPM
401: DMTPWSPTSS TSS

Arabidopsis Description

ADT6Arogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A178W954]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.