CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
nucleus 1
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER96348
EES07768
EES10725
OQU81040

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G44720.1	EER96348	AT3G44720.1	21798944
AT3G44720.1	EES10725	AT3G44720.1	21798944
AT3G44720.1	EES07768	AT3G54826.1	21798944
AT3G44720.1	OQU81040	AT5G65683.1	21798944
AT5G22630.1	EER96348	AT3G44720.1	21798944
AT5G22630.1	EES10725	AT3G44720.1	21798944
AT5G22630.1	EER96348	AT5G22630.1	21798944
AT5G22630.1	EES10725	AT5G22630.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d005351_P001	Maize	plastid	92.24	95.73
Os09t0565700-01	Rice	plastid	77.17	84.29
Os09t0566050-00	Rice	plastid	77.4	83.29
TraesCS5B01G372500.1	Wheat	plastid	78.54	81.9
TraesCS5A01G370200.1	Wheat	plastid	78.54	81.52
TraesCS5D01G379700.1	Wheat	plastid	78.54	81.32
HORVU5Hr1G092190.1	Barley	plastid	78.77	80.99
VIT_06s0061g01300.t01	Wine grape	mitochondrion, plastid	70.32	74.94
EES10725	Sorghum	plastid	71.92	72.92
KRH26581	Soybean	plastid	69.86	72.0
KRH22725	Soybean	plastid	69.41	71.7
Solyc11g066890.1.1	Tomato	plastid	69.63	71.43
CDY06307	Canola	cytosol	63.93	71.07
AT1G08250.1	Thale cress	plastid	66.89	70.94
Solyc06g074530.1.1	Tomato	plastid	70.09	70.9
PGSC0003DMT400018339	Potato	plastid	69.63	70.44
Bra031620.1-P	Field mustard	cytosol	63.24	70.3
PGSC0003DMT400068261	Potato	plastid	69.18	69.98
KRH25168	Soybean	plastid	68.26	69.86
CDY30526	Canola	plastid	66.67	69.86
Bra034372.1-P	Field mustard	plastid	66.44	69.62
AT2G27820.1	Thale cress	plastid	67.35	69.58
KRH30513	Soybean	plastid	67.81	69.39
CDY22691	Canola	cytosol	65.53	68.66
CDX77139	Canola	plastid	66.67	68.54
AT5G22630.1	Thale cress	plastid	63.7	65.65
CDX92343	Canola	plastid	63.47	65.41
CDY72678	Canola	plastid	62.33	65.16
CDY26946	Canola	plastid	63.01	64.94
Bra031619.1-P	Field mustard	plastid	62.1	64.92
AT3G44720.1	Thale cress	plastid	62.79	64.86
CDY09152	Canola	plastid	62.56	64.47
CDY59281	Canola	plastid	62.56	64.47
CDY22692	Canola	plastid	61.64	64.44
Bra002423.1-P	Field mustard	plastid	63.47	64.35
Bra020203.1-P	Field mustard	plastid	62.79	63.66
Bra019468.1-P	Field mustard	plastid	55.25	62.69
CDX77841	Canola	plastid	54.79	62.02
CDY30932	Canola	plastid	54.57	61.92
EER95050	Sorghum	plastid	46.58	52.99
OQU92273	Sorghum	plastid	36.3	38.04

Protein Annotations

KEGG:00400+4.2.1.51	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	EntrezGene:8059783	InterPro:ACT_dom
UniProt:C5X5W2	EnsemblPlants:EER96348	ProteinID:EER96348	ProteinID:EER96348.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004664	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009073	GO:GO:0009094
GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0016597	GO:GO:0016829
GO:GO:0047769	InterPro:IPR001086	InterPro:IPR002912	PFAM:PF00800	ScanProsite:PS00857	ScanProsite:PS00858
PFscan:PS51171	PFscan:PS51671	PANTHER:PTHR21022	PANTHER:PTHR21022:SF14	MetaCyc:PWY-7432	InterPro:Preph_deHydtase
InterPro:Preph_deHydtase_CS	EnsemblPlantsGene:SORBI_3002G133100	SUPFAM:SSF53850	SUPFAM:SSF55021	UniParc:UPI0001A835ED	RefSeq:XP_002459827.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:19069172..19071008

Molecular Weight (calculated)

47208.9 Da

IEP (calculated)

6.563

GRAVY (calculated)

-0.109

Length

438 amino acids

Sequence
(BLAST)

001: MEAAAVLDAF SAAPRHKLRP AAWWRSTRLA SQACRATAPF ARADWQTACA ILASNSSTGG GGGHDASSSS NNRQPAPRVN GQKPLPAPAP APALEEATPT
101: PTELDLVPVS NLPRPLSISD LSPAPMHGSQ LRVAYQGVPG AYSEAAAAKA YPGCDAIPCD QFEVAFQAVE LWIADRAVLP VENSLGGSIH RNYDLLLRHR
201: LHIVGEVQLP VHHCLLALPG VRRELLTRVI SHPQALAQCE LTLNAMGLNV AREAFDDTAG AAEHVAAGGL RDTAAIASAR AAELYGLQVL ADGIQDDAGN
301: VTRFVMLARE PIIPRTDRPF KTSIVFAHDT DGTSVLFKVL SAFAFRDISL TKIESRPHRH RPIRLVDDAN VGTAKHFEYM FYIDFQASMA DVRAQNALAE
401: IQEFTSFLRV LGSYPMDMTP WDAALSSSSR ADDTSQHY

Best Arabidopsis Sequence Match ( AT1G08250.1 )
(BLAST)

001: MKALSSSSPI LGASQPATAT ALIARSGRSE WQSSCAILTS KVISQEESES LPVPPVSGGV DHLNGHNSAA ARVPGMNLVP IEKSDSNPLV PQHRHNPLKP
101: LSMTDLSPAP MHGSNLRVAY QGVPGAYSEA AAGKAYPNCQ AIPCDQFEVA FQAVELWIAD RAVLPVENSL GGSIHRNYDL LLRHRLHIVG EVQLPVHHCL
201: LALPGVRKEF LTRVISHPQG LAQCEHTLTK LGLNVAREAV DDTAGAAEFI ASNNLRDTAA IASARAAEIY GLEILEDGIQ DDVSNVTRFV MLAREPIIPR
301: TDRPFKTSIV FAHEKGTSVL FKVLSAFAFR DISLTKIESR PNHNRPIRVV DDANVGTAKH FEYMFYVDFE ASMAEARAQN ALAEVQEFTS FLRVLGSYPM
401: DMTPWSPTSS TSS

Arabidopsis Description

ADT6Arogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A178W954]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.