Factsheet for Bra034372.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30526	Canola	plastid	99.04	99.04
CDX77139	Canola	plastid	98.33	96.48
AT2G27820.1	Thale cress	plastid	90.19	88.92
Bra031620.1-P	Field mustard	cytosol	75.12	79.7
VIT_06s0061g01300.t01	Wine grape	mitochondrion, plastid	77.75	79.08
GSMUA_Achr8P07590_001	Banana	cytosol	53.59	78.6
KRH26581	Soybean	plastid	77.75	76.47
KRH22725	Soybean	plastid	76.79	75.71
HORVU2Hr1G072210.1	Barley	cytosol, mitochondrion, plastid	63.16	74.58
Bra031619.1-P	Field mustard	plastid	73.21	73.03
Os09t0565700-01	Rice	plastid	69.62	72.57
KRH25168	Soybean	plastid	73.68	71.96
KRH30513	Soybean	plastid	73.44	71.73
Os09t0566050-00	Rice	plastid	69.38	71.25
TraesCS2D01G290000.1	Wheat	plastid	69.38	70.05
TraesCS2B01G308500.1	Wheat	plastid	69.38	70.05
Zm00001d025333_P001	Maize	plastid	70.1	69.93
TraesCS2A01G292000.1	Wheat	plastid	69.14	69.81
TraesCS5B01G372500.1	Wheat	plastid	70.1	69.76
TraesCS5A01G370200.1	Wheat	plastid	70.1	69.43
TraesCS5D01G379700.1	Wheat	plastid	70.1	69.27
HORVU5Hr1G092190.1	Barley	plastid	70.33	69.01
Zm00001d003830_P001	Maize	plastid	70.33	69.01
Zm00001d005351_P001	Maize	plastid	69.62	68.96
Bra002423.1-P	Field mustard	plastid	71.05	68.75
TraesCS2B01G308400.1	Wheat	plastid	68.18	68.02
Os04t0406600-01	Rice	plastid	70.81	67.89
Bra020203.1-P	Field mustard	plastid	70.1	67.82
EES10725	Sorghum	plastid	70.1	67.82
TraesCS2D01G289900.2	Wheat	plastid	66.99	67.31
Bra019468.1-P	Field mustard	plastid	61.48	66.58
EER96348	Sorghum	plastid	69.62	66.44
GSMUA_Achr3P22810_001	Banana	plastid	60.29	64.45
GSMUA_AchrUn_...	Banana	plastid	61.0	64.07
GSMUA_Achr8P33080_001	Banana	plastid	66.51	63.76
GSMUA_Achr10P...	Banana	plastid	31.34	62.98
HORVU2Hr1G072180.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	66.75	60.65
TraesCS2A01G291900.1	Wheat	plastid	67.22	60.43
Bra029665.1-P	Field mustard	plastid	51.2	56.46
Bra001262.1-P	Field mustard	plastid	50.0	55.15
Bra016813.1-P	Field mustard	mitochondrion	49.28	53.79

Protein Annotations

KEGG:00400+4.2.1.51	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	InterPro:ACT_dom	EnsemblPlantsGene:Bra034372
EnsemblPlants:Bra034372.1	EnsemblPlants:Bra034372.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004664	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006571	GO:GO:0008150
GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009073	GO:GO:0009094	GO:GO:0009507
GO:GO:0009536	GO:GO:0009570	GO:GO:0009628	GO:GO:0009987	GO:GO:0010244	GO:GO:0016829
GO:GO:0047769	GO:GO:0080167	InterPro:IPR001086	InterPro:IPR002912	UniProt:M4EZX9	PFAM:PF00800
ScanProsite:PS00857	ScanProsite:PS00858	PFscan:PS51171	PFscan:PS51671	PANTHER:PTHR21022	PANTHER:PTHR21022:SF14
InterPro:Preph_deHydtase	InterPro:Preph_deHydtase_CS	SUPFAM:SSF53850	SUPFAM:SSF55021	UniParc:UPI0002543A83	SEG:seg

Description

AT2G27820 (E=2e-172) PD1, ADT3 | PD1 (PREPHENATE DEHYDRATASE 1); arogenate dehydratase/ prephenate dehydratase

Coordinates

chrA04:+:12187589..12188845

Molecular Weight (calculated)

45623.1 Da

IEP (calculated)

7.170

GRAVY (calculated)

-0.135

Length

418 amino acids

Sequence
(BLAST)

001: MRTLLPSSPM LRYSQSPATV TPSRRRFIHC GNRSDSSAIG SSRSDWQSSW AILSSKVVSQ EQSESLLSSV NGHSNGSLNL VPFDNNSLAP NQQSKKTTPL
101: SITDLSPAPM HGSNLRVAYQ GVPGAYSEAA AGKAYPNCQA IPCDQFEVAF QAVELWIADR AVLPVENSLG GSIHRNYDLL LRHRLHIVGE VQLPVHHCLL
201: ALPGVRKEFL TRVISHPQGL AQCEHTLTKL GLNVAREAVD DTAGAAEFIA ANNVRDTAAI ASARAAEIYG LEILADGIQD DASNVTRFVM LAREPIIPRT
301: DRPFKTSIVF AHEKGTCVLF KVLSAFAFRN ISLTKIESRP NHNVPIRLVD EANVGTAKHF EYMFYVDFEA SMAEARAQNA LSEVQEFTSF LRVLGSYPMD
401: MTSWSPSPPS SSSSTLSL

Best Arabidopsis Sequence Match ( AT2G27820.1 )
(BLAST)

001: MRTLLPSHTP ATVTTAARRR HVIHCAGKRS DSFSINSSSS DWQSSCAILS SKVNSQEQSE SLSSNSNGSS SYHVSAVNGH NNGAGVSDLN LVPFNNNQSI
101: QSKKPLSISD LSPAPMHGSN LRVAYQGVPG AYSEAAAGKA YPNCQAIPCD QFEVAFQAVE LWIADRAVLP VENSLGGSIH RNYDLLLRHR LHIVGEVQLP
201: VHHCLIALPG VRKEFLTRVI SHPQGLAQCE HTLTKLGLNV AREAVDDTAG AAEFIAANNI RDTAAIASAR AAEIYGLEIL EDGIQDDASN VTRFVMLARE
301: PIIPRTDRPF KTSIVFAHEK GTCVLFKVLS AFAFRNISLT KIESRPNHNV PIRLVDEANV GTAKHFEYMF YIDFEASMAE SRAQNALSEV QEFTSFLRVL
401: GSYPMDMTSW SPSSSSSSSS TFSL

Arabidopsis Description

ADT3Arogenate dehydratase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUY3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.