Factsheet for Bra031619.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY72678	Canola	plastid	98.81	98.81
Bra031620.1-P	Field mustard	cytosol	74.22	78.93
AT1G08250.1	Thale cress	plastid	73.75	74.82
GSMUA_Achr8P07590_001	Banana	cytosol	50.84	74.74
Bra034372.1-P	Field mustard	plastid	73.03	73.21
VIT_06s0061g01300.t01	Wine grape	mitochondrion, plastid	68.97	70.32
HORVU2Hr1G072210.1	Barley	cytosol, mitochondrion, plastid	58.0	68.64
KRH26581	Soybean	plastid	68.74	67.76
KRH22725	Soybean	plastid	68.26	67.45
Os09t0565700-01	Rice	plastid	63.96	66.83
KRH25168	Soybean	plastid	67.3	65.89
Os09t0566050-00	Rice	plastid	63.96	65.85
TraesCS5B01G372500.1	Wheat	plastid	65.39	65.24
TraesCS2D01G290000.1	Wheat	plastid	64.2	64.98
TraesCS2B01G308500.1	Wheat	plastid	64.2	64.98
TraesCS2A01G292000.1	Wheat	plastid	64.2	64.98
TraesCS5A01G370200.1	Wheat	plastid	65.39	64.93
KRH30513	Soybean	plastid	65.87	64.49
Zm00001d025333_P001	Maize	plastid	64.44	64.44
TraesCS5D01G379700.1	Wheat	plastid	64.92	64.3
HORVU5Hr1G092190.1	Barley	plastid	65.16	64.08
Zm00001d003830_P001	Maize	plastid	65.16	64.08
Zm00001d005351_P001	Maize	plastid	64.2	63.74
EES10725	Sorghum	plastid	65.16	63.19
Os04t0406600-01	Rice	plastid	65.63	63.07
TraesCS2B01G308400.1	Wheat	plastid	62.77	62.77
TraesCS2D01G289900.2	Wheat	plastid	61.81	62.26
EER96348	Sorghum	plastid	64.92	62.1
GSMUA_Achr3P22810_001	Banana	plastid	56.8	60.87
Bra002423.1-P	Field mustard	plastid	62.53	60.65
GSMUA_Achr10P...	Banana	plastid	30.07	60.58
Bra020203.1-P	Field mustard	plastid	62.29	60.42
Bra019468.1-P	Field mustard	plastid	55.61	60.36
GSMUA_AchrUn_...	Banana	plastid	55.85	58.79
GSMUA_Achr8P33080_001	Banana	plastid	60.86	58.49
HORVU2Hr1G072180.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	62.05	56.52
TraesCS2A01G291900.1	Wheat	plastid	62.53	56.34
Bra029665.1-P	Field mustard	plastid	47.97	53.03
Bra001262.1-P	Field mustard	plastid	46.54	51.45
Bra016813.1-P	Field mustard	mitochondrion	46.78	51.17

Protein Annotations

KEGG:00400+4.2.1.51	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	InterPro:ACT_dom	EnsemblPlantsGene:Bra031619
EnsemblPlants:Bra031619.1	EnsemblPlants:Bra031619.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004664	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652
GO:GO:0009058	GO:GO:0009073	GO:GO:0009094	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570
GO:GO:0009987	GO:GO:0016829	GO:GO:0047769	InterPro:IPR001086	InterPro:IPR002912	UniProt:M4ES41
PFAM:PF00800	ScanProsite:PS00857	ScanProsite:PS00858	PFscan:PS51171	PFscan:PS51671	PANTHER:PTHR21022
PANTHER:PTHR21022:SF14	InterPro:Preph_deHydtase	InterPro:Preph_deHydtase_CS	SUPFAM:SSF53850	SUPFAM:SSF55021	UniParc:UPI0002543313
SEG:seg	:	:	:	:	:

Description

AT2G27820 (E=2e-146) PD1, ADT3 | PD1 (PREPHENATE DEHYDRATASE 1); arogenate dehydratase/ prephenate dehydratase

Coordinates

chrA09:+:35556503..35557762

Molecular Weight (calculated)

45974.0 Da

IEP (calculated)

8.552

GRAVY (calculated)

-0.207

Length

419 amino acids

Sequence
(BLAST)

001: MKAIAPSHLK LMFGSSQPTS RSYSCVQNAQ RSDSCGTSRS EWRSTFATLT SKVVTQKTLP MPPVSVGIDH VNGHNRAARV LGMNQKPLSV NDLPPAPMHG
101: GANLRVAYQG VPGAYSEAAA CKAYPNYESV PCDQFEVAFQ AVELWIADRA VLPIENSLGG SIHRNYDLLL RHCLHIVGEV QLPVHHCLLA LPGVRKEFLT
201: CVMSHPQGLA QCERTLTKLG LNVTRKAVDN TAVAAEHIAA NNKRDTAAIA SARAAEIYGL EILEDGLQDD ASNVTRFVML AREPIVPRTD RPFKTSIVFA
301: HEKGTSVLYK VLSAFAARDI SLTKIESRPN HNRPIRLVDE ANVGTAKHFE YMFYIDFEAS MAETRVQNAL SEVRELTSFL RVLGSYPMDM TPWSPSSSTS
401: HTASSKMNHS YGNVNMAKP

Best Arabidopsis Sequence Match ( AT1G08250.1 )
(BLAST)

001: MKALSSSSPI LGASQPATAT ALIARSGRSE WQSSCAILTS KVISQEESES LPVPPVSGGV DHLNGHNSAA ARVPGMNLVP IEKSDSNPLV PQHRHNPLKP
101: LSMTDLSPAP MHGSNLRVAY QGVPGAYSEA AAGKAYPNCQ AIPCDQFEVA FQAVELWIAD RAVLPVENSL GGSIHRNYDL LLRHRLHIVG EVQLPVHHCL
201: LALPGVRKEF LTRVISHPQG LAQCEHTLTK LGLNVAREAV DDTAGAAEFI ASNNLRDTAA IASARAAEIY GLEILEDGIQ DDVSNVTRFV MLAREPIIPR
301: TDRPFKTSIV FAHEKGTSVL FKVLSAFAFR DISLTKIESR PNHNRPIRVV DDANVGTAKH FEYMFYVDFE ASMAEARAQN ALAEVQEFTS FLRVLGSYPM
401: DMTPWSPTSS TSS

Arabidopsis Description

ADT6Arogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A178W954]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.