Factsheet for Bra002423.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra002423.1-P
Bra019468.1-P
Bra020203.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G22630.1	Bra019468.1-P	AT3G44720.1	21798944
AT5G22630.1	Bra002423.1-P	AT5G22630.1	21798944
AT5G22630.1	Bra020203.1-P	AT5G22630.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92343	Canola	plastid	96.76	98.35
CDY26946	Canola	plastid	95.83	97.41
AT5G22630.1	Thale cress	plastid	91.2	92.71
Bra020203.1-P	Field mustard	plastid	91.9	91.9
Bra019468.1-P	Field mustard	plastid	75.0	83.94
KRH26581	Soybean	plastid	72.92	74.12
GSMUA_Achr8P07590_001	Banana	cytosol	48.84	74.04
KRH22725	Soybean	plastid	71.76	73.11
Solyc06g074530.1.1	Tomato	plastid	72.22	72.06
Solyc11g066890.1.1	Tomato	plastid	71.06	71.9
PGSC0003DMT400018339	Potato	plastid	71.76	71.59
KRH30513	Soybean	plastid	70.6	71.26
Bra034372.1-P	Field mustard	plastid	68.75	71.05
KRH25168	Soybean	plastid	70.37	71.03
PGSC0003DMT400068261	Potato	plastid	70.37	70.21
HORVU2Hr1G072210.1	Barley	cytosol, mitochondrion, plastid	56.94	69.49
Os09t0565700-01	Rice	plastid	64.12	69.08
Bra031620.1-P	Field mustard	cytosol	62.04	68.02
Os09t0566050-00	Rice	plastid	63.89	67.81
TraesCS2D01G290000.1	Wheat	plastid	63.66	66.43
Zm00001d025333_P001	Maize	plastid	64.35	66.35
TraesCS2B01G308500.1	Wheat	plastid	63.43	66.18
TraesCS2A01G292000.1	Wheat	plastid	63.19	65.94
Zm00001d005351_P001	Maize	plastid	64.35	65.88
TraesCS5B01G372500.1	Wheat	plastid	63.66	65.48
Zm00001d003830_P001	Maize	plastid	64.35	65.26
TraesCS5D01G379700.1	Wheat	plastid	63.89	65.25
TraesCS5A01G370200.1	Wheat	plastid	63.43	64.93
EES10725	Sorghum	plastid	64.81	64.81
Os04t0406600-01	Rice	plastid	65.28	64.68
GSMUA_AchrUn_...	Banana	plastid	59.49	64.57
HORVU5Hr1G092190.1	Barley	plastid	63.43	64.32
TraesCS2B01G308400.1	Wheat	plastid	62.04	63.96
EER96348	Sorghum	plastid	64.35	63.47
TraesCS2D01G289900.2	Wheat	plastid	61.11	63.46
GSMUA_Achr8P33080_001	Banana	plastid	63.43	62.84
GSMUA_Achr3P22810_001	Banana	plastid	56.71	62.66
Bra031619.1-P	Field mustard	plastid	60.65	62.53
GSMUA_Achr10P...	Banana	plastid	28.24	58.65
TraesCS2A01G291900.1	Wheat	plastid	61.57	57.2
HORVU2Hr1G072180.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	60.88	57.17
Bra029665.1-P	Field mustard	plastid	47.22	53.83
Bra001262.1-P	Field mustard	plastid	46.06	52.51
Bra016813.1-P	Field mustard	mitochondrion	46.53	52.48

Protein Annotations

KEGG:00400+4.2.1.51	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	InterPro:ACT_dom	EnsemblPlantsGene:Bra002423
EnsemblPlants:Bra002423.1	EnsemblPlants:Bra002423.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004664	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652
GO:GO:0009058	GO:GO:0009073	GO:GO:0009094	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570
GO:GO:0009987	GO:GO:0016829	GO:GO:0047769	InterPro:IPR001086	InterPro:IPR002912	UniProt:M4CDZ2
PFAM:PF00800	ScanProsite:PS00857	ScanProsite:PS00858	PFscan:PS51171	PFscan:PS51671	PANTHER:PTHR21022
PANTHER:PTHR21022:SF14	InterPro:Preph_deHydtase	InterPro:Preph_deHydtase_CS	SUPFAM:SSF53850	SUPFAM:SSF55021	UniParc:UPI000254449D
SEG:seg	:	:	:	:	:

Description

AT5G22630 (E=8e-221) ADT5 | ADT5 (arogenate dehydratase 5); arogenate dehydratase/ prephenate dehydratase

Coordinates

chrA10:-:9663021..9664319

Molecular Weight (calculated)

46712.2 Da

IEP (calculated)

7.024

GRAVY (calculated)

-0.122

Length

432 amino acids

Sequence
(BLAST)

001: MQTVSPAFSC DLKSLIQTNL TAKTARYSHV NRKRVSVLCS YRSESFSFPN GIGSSRADWQ SSCAILASKV ASAENSSSIT RGLADQVAAV NGHSNGSVNL
101: SLVPSETKNG KPGLVQPLTN TDLSPAPSHG STLRVAYQGV PGAYSEAAAG KAYPNSEAIP CDQFDVAFQA VELWISDRAV LPVENSLGGS IHRNYDLLLR
201: HRLHIVGEVQ IPVHHCLLAL PGVRADCITR VISHPQALAQ TEGSLNKLTP RAAIEAFHDT AAAAEYIATN NLRDTAAVAS ARAAELYGLQ ILADGIQDDA
301: GNVTRFLMLA REPIIPRTDR PFKTSIVFAA QEHQGTSVLF KVLSAFAFRN ISLTKIESRP HHNCPLRVVD DGSVGTKKHF EYTFYVDFEA SMAEARAQNA
401: LAEVQEYTSF LRVLGSYPMD MTPWSTLPSE DA

Best Arabidopsis Sequence Match ( AT5G22630.1 )
(BLAST)

001: MQTISPAFSC DLKSVIQPNL TAKKARYSHV NGKRVSVRCS YRSESFSFPN GVGSSRADWQ SSCAILASKV VSAENSSSVA VVNGHSNGSV DLSLVPSKSQ
101: HNGKPGLIQP LTITDLSPAP SHGSTLRVAY QGVPGAYSEA AAGKAYPNSE AIPCDQFDVA FQAVELWIAD RAVLPVENSL GGSIHRNYDL LLRHRLHIVG
201: EVQIPVHHCL LALPGVRTDC ITRVISHPQA LAQTEGSLNK LTPKAAIEAF HDTAAAAEYI AANNLHDTAA VASARAAELY GLQILADGIQ DDAGNVTRFL
301: MLARDPIIPR TDRPFKTSIV FAAQEHKGTS VLFKVLSAFA FRNISLTKIE SRPHQNCPVR VVGDENVGTS KHFEYTFYVD FEASMAEARA QNALAEVQEY
401: TSFLRVLGSY PMDMTPWSTL PSEDV

Arabidopsis Description

ADT5Arogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A178UL55]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.