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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • plastid 9
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d003830_P001 Maize plastid 93.29 94.6
Zm00001d025333_P001 Maize plastid 90.28 93.08
TraesCS2D01G290000.1 Wheat plastid 86.34 90.1
TraesCS2B01G308500.1 Wheat plastid 86.34 90.1
TraesCS2A01G292000.1 Wheat plastid 85.88 89.61
Os04t0406600-01 Rice plastid 88.43 87.61
HORVU2Hr1G072210.1 Barley cytosol, mitochondrion, plastid 69.68 85.03
TraesCS2B01G308400.1 Wheat plastid 78.7 81.15
TraesCS2D01G289900.2 Wheat plastid 77.78 80.77
VIT_06s0061g01300.t01 Wine grape mitochondrion, plastid 71.53 75.18
HORVU2Hr1G072180.1 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole 78.47 73.7
TraesCS2A01G291900.1 Wheat plastid 77.78 72.26
KRH26581 Soybean plastid 70.83 72.0
EER96348 Sorghum plastid 72.92 71.92
KRH22725 Soybean plastid 70.37 71.7
AT1G08250.1 Thale cress plastid 68.29 71.43
CDY06307 Canola cytosol 65.05 71.32
PGSC0003DMT400018339 Potato plastid 71.06 70.9
Bra031620.1-P Field mustard cytosol 64.58 70.81
Solyc11g066890.1.1 Tomato plastid 69.91 70.73
Solyc06g074530.1.1 Tomato plastid 70.83 70.67
PGSC0003DMT400068261 Potato plastid 70.6 70.44
CDY30526 Canola plastid 68.06 70.33
Bra034372.1-P Field mustard plastid 67.82 70.1
CDX77139 Canola plastid 68.52 69.48
GSMUA_Achr10P... Banana plastid 33.33 69.23
AT2G27820.1 Thale cress plastid 67.59 68.87
KRH25168 Soybean plastid 67.59 68.22
KRH30513 Soybean plastid 67.36 67.99
CDY22691 Canola cytosol 65.51 67.7
AT3G44720.1 Thale cress plastid 65.51 66.75
AT5G22630.1 Thale cress plastid 65.05 66.12
CDY09152 Canola plastid 64.58 65.65
CDX92343 Canola plastid 64.58 65.65
CDY72678 Canola plastid 63.66 65.63
CDY26946 Canola plastid 64.35 65.41
CDY59281 Canola plastid 64.12 65.18
Bra031619.1-P Field mustard plastid 63.19 65.16
Bra019468.1-P Field mustard plastid 58.1 65.03
Bra002423.1-P Field mustard plastid 64.81 64.81
Bra020203.1-P Field mustard plastid 64.58 64.58
CDY22692 Canola plastid 62.5 64.44
CDY30932 Canola plastid 57.41 64.25
CDX77841 Canola plastid 56.48 63.05
EER95050 Sorghum plastid 46.3 51.95
OQU92273 Sorghum plastid 35.19 36.36
Protein Annotations
KEGG:00400+4.2.1.51Gene3D:3.30.70.260Gene3D:3.40.190.10MapMan:4.1.5.2.4EntrezGene:8075256InterPro:ACT_dom
UniProt:C5YFR9EnsemblPlants:EES10725ProteinID:EES10725ProteinID:EES10725.1GO:GO:0003674GO:GO:0003824
GO:GO:0004664GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0008150GO:GO:0008152GO:GO:0008652GO:GO:0009058GO:GO:0009073GO:GO:0009094
GO:GO:0009507GO:GO:0009536GO:GO:0009570GO:GO:0009987GO:GO:0016597GO:GO:0016829
GO:GO:0047769InterPro:IPR001086InterPro:IPR002912PFAM:PF00800ScanProsite:PS00857ScanProsite:PS00858
PFscan:PS51171PFscan:PS51671PANTHER:PTHR21022PANTHER:PTHR21022:SF13MetaCyc:PWY-7432InterPro:Preph_deHydtase
InterPro:Preph_deHydtase_CSEnsemblPlantsGene:SORBI_3006G066200SUPFAM:SSF53850SUPFAM:SSF55021UniParc:UPI0001A86EA6RefSeq:XP_002446397.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr6:+:42651494..42654196
Molecular Weight (calculated)
45830.6 Da
IEP (calculated)
7.059
GRAVY (calculated)
-0.024
Length
432 amino acids
Sequence
(BLAST)
001: MAAASMIKAP VGQNPRLACH APARGGGVVR CSLQGAVVGG RADWQSSCAV LSSKVAALGT HSINGHVAPA PAPEPSQNGA VLDLVPVTSI TGGAITKANL
101: PQPLRIADLS PAPMHGSQLR VAYQGVPGAY SEKAAGKAYP GSDAIPCDQF EVAFQAVELW IADRAVLPVE NSLGGSIHRN YDLLLRHRLH IVGEVQLPVH
201: HCLLALPGVR KECLTRVMSH PQALAQCEHT LTAMGLNVVR EAFDDTAGAA EYVAANGLRD TAAIASSRAA ELYGMEVLAD GVQDDSGNVT RFVMLAREPI
301: VPRTDRPFKT SIVFAHDKEG TSVLFKVLSA FAFRDISLTK IESRPHRHRP IRLVDDANVG TAKHFEYMFY VDFQASLAEP RAQNALAEVQ EYTSFLRVLG
401: SYPMDMTPMT AGSSTTISSS DGPSSSSSSS SS
Best Arabidopsis Sequence Match ( AT1G08250.1 )
(BLAST)
001: MKALSSSSPI LGASQPATAT ALIARSGRSE WQSSCAILTS KVISQEESES LPVPPVSGGV DHLNGHNSAA ARVPGMNLVP IEKSDSNPLV PQHRHNPLKP
101: LSMTDLSPAP MHGSNLRVAY QGVPGAYSEA AAGKAYPNCQ AIPCDQFEVA FQAVELWIAD RAVLPVENSL GGSIHRNYDL LLRHRLHIVG EVQLPVHHCL
201: LALPGVRKEF LTRVISHPQG LAQCEHTLTK LGLNVAREAV DDTAGAAEFI ASNNLRDTAA IASARAAEIY GLEILEDGIQ DDVSNVTRFV MLAREPIIPR
301: TDRPFKTSIV FAHEKGTSVL FKVLSAFAFR DISLTKIESR PNHNRPIRVV DDANVGTAKH FEYMFYVDFE ASMAEARAQN ALAEVQEFTS FLRVLGSYPM
401: DMTPWSPTSS TSS
Arabidopsis Description
ADT6Arogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A178W954]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.