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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:plastid
ChloroP:plastid
MultiLoc:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G045100.1
TraesCS2A01G291900.1
TraesCS2A01G292000.1
TraesCS2B01G057300.1
TraesCS2B01G308400.1
TraesCS2B01G308500.1
TraesCS2D01G043700.1
TraesCS2D01G289900.2
TraesCS2D01G290000.1
TraesCS5A01G370200.1
TraesCS5B01G372500.1
TraesCS5D01G379700.1
TraesCS6A01G395100.1
TraesCS6B01G435000.1
TraesCS6D01G380400.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G44720.1 TraesCS2A01G291900.1 AT3G44720.1 21798944
AT3G44720.1 TraesCS2A01G292000.1 AT3G44720.1 21798944
AT3G44720.1 TraesCS2B01G308400.1 AT3G44720.1 21798944
AT3G44720.1 TraesCS2B01G308500.1 AT3G44720.1 21798944
AT3G44720.1 TraesCS2D01G289900.2 AT3G44720.1 21798944
AT3G44720.1 TraesCS2D01G290000.1 AT3G44720.1 21798944
AT3G44720.1 TraesCS5A01G370200.1 AT3G44720.1 21798944
AT3G44720.1 TraesCS5B01G372500.1 AT3G44720.1 21798944
AT3G44720.1 TraesCS5D01G379700.1 AT3G44720.1 21798944
AT3G44720.1 TraesCS6A01G395100.1 AT3G54826.1 21798944
AT3G44720.1 TraesCS6B01G435000.1 AT3G54826.1 21798944
AT3G44720.1 TraesCS6D01G380400.1 AT3G54826.1 21798944
AT3G44720.1 TraesCS2A01G045100.1 AT5G65683.1 21798944
AT3G44720.1 TraesCS2B01G057300.1 AT5G65683.1 21798944
AT3G44720.1 TraesCS2D01G043700.1 AT5G65683.1 21798944
AT5G22630.1 TraesCS2A01G291900.1 AT3G44720.1 21798944
AT5G22630.1 TraesCS2A01G292000.1 AT3G44720.1 21798944
AT5G22630.1 TraesCS2B01G308400.1 AT3G44720.1 21798944
AT5G22630.1 TraesCS2B01G308500.1 AT3G44720.1 21798944
AT5G22630.1 TraesCS2D01G289900.2 AT3G44720.1 21798944
AT5G22630.1 TraesCS2D01G290000.1 AT3G44720.1 21798944
AT5G22630.1 TraesCS5A01G370200.1 AT3G44720.1 21798944
AT5G22630.1 TraesCS5B01G372500.1 AT3G44720.1 21798944
AT5G22630.1 TraesCS5D01G379700.1 AT3G44720.1 21798944
AT5G22630.1 TraesCS2A01G291900.1 AT5G22630.1 21798944
AT5G22630.1 TraesCS2A01G292000.1 AT5G22630.1 21798944
AT5G22630.1 TraesCS2B01G308400.1 AT5G22630.1 21798944
AT5G22630.1 TraesCS2B01G308500.1 AT5G22630.1 21798944
AT5G22630.1 TraesCS2D01G289900.2 AT5G22630.1 21798944
AT5G22630.1 TraesCS2D01G290000.1 AT5G22630.1 21798944
AT5G22630.1 TraesCS5A01G370200.1 AT5G22630.1 21798944
AT5G22630.1 TraesCS5B01G372500.1 AT5G22630.1 21798944
AT5G22630.1 TraesCS5D01G379700.1 AT5G22630.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2B01G308400.1 Wheat plastid 97.6 96.9
TraesCS2A01G291900.1 Wheat plastid 96.39 86.24
HORVU2Hr1G072180.1 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole 94.71 85.65
TraesCS2D01G290000.1 Wheat plastid 81.25 81.64
Zm00001d025333_P001 Maize plastid 79.81 79.24
Zm00001d003830_P001 Maize plastid 80.77 78.87
EES10725 Sorghum plastid 80.77 77.78
Os04t0406600-01 Rice plastid 81.25 77.52
VIT_06s0061g01300.t01 Wine grape mitochondrion, plastid 69.23 70.07
TraesCS5D01G379700.1 Wheat plastid 70.67 69.5
CDY06307 Canola cytosol 64.66 68.27
AT1G08250.1 Thale cress plastid 67.31 67.8
Bra031620.1-P Field mustard cytosol 64.18 67.77
KRH26581 Soybean plastid 68.75 67.29
KRH22725 Soybean plastid 68.51 67.22
Bra034372.1-P Field mustard plastid 67.31 66.99
CDY30526 Canola plastid 67.31 66.99
PGSC0003DMT400018339 Potato plastid 69.47 66.74
Solyc06g074530.1.1 Tomato plastid 69.23 66.51
PGSC0003DMT400068261 Potato plastid 68.75 66.05
Solyc11g066890.1.1 Tomato plastid 67.79 66.04
GSMUA_Achr10P... Banana plastid 32.93 65.87
CDX77139 Canola plastid 67.31 65.73
AT2G27820.1 Thale cress plastid 66.83 65.57
CDY22691 Canola cytosol 65.14 64.83
KRH30513 Soybean plastid 66.11 64.25
KRH25168 Soybean plastid 65.87 64.02
AT3G44720.1 Thale cress plastid 63.94 62.74
CDX92343 Canola plastid 63.46 62.12
AT5G22630.1 Thale cress plastid 63.46 62.12
CDY09152 Canola plastid 63.46 62.12
CDY72678 Canola plastid 62.5 62.05
Bra031619.1-P Field mustard plastid 62.26 61.81
CDY26946 Canola plastid 62.98 61.65
CDY59281 Canola plastid 62.98 61.65
CDY22692 Canola plastid 62.02 61.58
Bra002423.1-P Field mustard plastid 63.46 61.11
Bra020203.1-P Field mustard plastid 63.46 61.11
Bra019468.1-P Field mustard plastid 56.25 60.62
CDY30932 Canola plastid 55.53 59.84
CDX77841 Canola plastid 55.05 59.17
TraesCS2D01G080100.1 Wheat plastid 48.08 52.36
TraesCS4D01G198400.1 Wheat plastid 47.84 49.87
TraesCS4D01G198200.1 Wheat plastid 45.43 47.49
TraesCS1D01G188500.1 Wheat plastid 35.34 36.12
Protein Annotations
KEGG:00400+4.2.1.51Gene3D:3.30.70.260Gene3D:3.40.190.10MapMan:4.1.5.2.4InterPro:ACT_domGO:GO:0003674
GO:GO:0003824GO:GO:0004664GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009094
GO:GO:0009987InterPro:IPR001086InterPro:IPR002912PFAM:PF00800ScanProsite:PS00857ScanProsite:PS00858
PFscan:PS51171PFscan:PS51671PANTHER:PTHR21022PANTHER:PTHR21022:SF13InterPro:Preph_deHydtaseInterPro:Preph_deHydtase_CS
SUPFAM:SSF53850SUPFAM:SSF55021EnsemblPlantsGene:TraesCS2D01G289900EnsemblPlants:TraesCS2D01G289900.2TIGR:cd04905TIGR:cd13631
SEG:seg:::::
Description
No Description!
Coordinates
chr2D:-:372014617..372015867
Molecular Weight (calculated)
44638.3 Da
IEP (calculated)
7.424
GRAVY (calculated)
-0.027
Length
416 amino acids
Sequence
(BLAST)
001: MAVVNFVKPH IGQSPKLQGR TPRRGSGVVR SSLQGAVVGN RAEWLTSCAV LSSKVAALAP HSTNGHLALA VAASNGAVLD LVPVKTVDGS ARSLPAPLRI
101: ADLSPAPMHG SELRVAYQGV PGAYSEKASA KAYPGSDAIP CDQFEVAFQA VENWVADRAV LPVENSLGGS IHRNYDLLLR HRLHIVGEVQ LPVHHCLLAL
201: PGVRREDITR VISHPQALAQ CEHTLTRMPG LNAAREAFDD TAGAAEYVAA NGLRDTAAIA SSRAAELYGM EVLADGIQDD SGNVTRFVML AREPIVPRMD
301: RPFKTSIVFA HDKEGTSVLF KVLSAFAFRD ISLTKIESRP HRPIRLADSS TAPKQFEYMF YVDFQASLAD PRVQNALAEV QEFTSFLRVL GSYPMDMTPM
401: AAGVASSESS SAYSSS
Best Arabidopsis Sequence Match ( AT1G08250.1 )
(BLAST)
001: MKALSSSSPI LGASQPATAT ALIARSGRSE WQSSCAILTS KVISQEESES LPVPPVSGGV DHLNGHNSAA ARVPGMNLVP IEKSDSNPLV PQHRHNPLKP
101: LSMTDLSPAP MHGSNLRVAY QGVPGAYSEA AAGKAYPNCQ AIPCDQFEVA FQAVELWIAD RAVLPVENSL GGSIHRNYDL LLRHRLHIVG EVQLPVHHCL
201: LALPGVRKEF LTRVISHPQG LAQCEHTLTK LGLNVAREAV DDTAGAAEFI ASNNLRDTAA IASARAAEIY GLEILEDGIQ DDVSNVTRFV MLAREPIIPR
301: TDRPFKTSIV FAHEKGTSVL FKVLSAFAFR DISLTKIESR PNHNRPIRVV DDANVGTAKH FEYMFYVDFE ASMAEARAQN ALAEVQEFTS FLRVLGSYPM
401: DMTPWSPTSS TSS
Arabidopsis Description
ADT6Arogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A178W954]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.