Factsheet for TraesCS2A01G292000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G045100.1
TraesCS2A01G291900.1
TraesCS2A01G292000.1
TraesCS2B01G057300.1
TraesCS2B01G308400.1
TraesCS2B01G308500.1
TraesCS2D01G043700.1
TraesCS2D01G289900.2
TraesCS2D01G290000.1
TraesCS5A01G370200.1
TraesCS5B01G372500.1
TraesCS5D01G379700.1
TraesCS6A01G395100.1
TraesCS6B01G435000.1
TraesCS6D01G380400.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G44720.1	TraesCS2A01G291900.1	AT3G44720.1	21798944
AT3G44720.1	TraesCS2A01G292000.1	AT3G44720.1	21798944
AT3G44720.1	TraesCS2B01G308400.1	AT3G44720.1	21798944
AT3G44720.1	TraesCS2B01G308500.1	AT3G44720.1	21798944
AT3G44720.1	TraesCS2D01G289900.2	AT3G44720.1	21798944
AT3G44720.1	TraesCS2D01G290000.1	AT3G44720.1	21798944
AT3G44720.1	TraesCS5A01G370200.1	AT3G44720.1	21798944
AT3G44720.1	TraesCS5B01G372500.1	AT3G44720.1	21798944
AT3G44720.1	TraesCS5D01G379700.1	AT3G44720.1	21798944
AT3G44720.1	TraesCS6A01G395100.1	AT3G54826.1	21798944
AT3G44720.1	TraesCS6B01G435000.1	AT3G54826.1	21798944
AT3G44720.1	TraesCS6D01G380400.1	AT3G54826.1	21798944
AT3G44720.1	TraesCS2A01G045100.1	AT5G65683.1	21798944
AT3G44720.1	TraesCS2B01G057300.1	AT5G65683.1	21798944
AT3G44720.1	TraesCS2D01G043700.1	AT5G65683.1	21798944
AT5G22630.1	TraesCS2A01G291900.1	AT3G44720.1	21798944
AT5G22630.1	TraesCS2A01G292000.1	AT3G44720.1	21798944
AT5G22630.1	TraesCS2B01G308400.1	AT3G44720.1	21798944
AT5G22630.1	TraesCS2B01G308500.1	AT3G44720.1	21798944
AT5G22630.1	TraesCS2D01G289900.2	AT3G44720.1	21798944
AT5G22630.1	TraesCS2D01G290000.1	AT3G44720.1	21798944
AT5G22630.1	TraesCS5A01G370200.1	AT3G44720.1	21798944
AT5G22630.1	TraesCS5B01G372500.1	AT3G44720.1	21798944
AT5G22630.1	TraesCS5D01G379700.1	AT3G44720.1	21798944
AT5G22630.1	TraesCS2A01G291900.1	AT5G22630.1	21798944
AT5G22630.1	TraesCS2A01G292000.1	AT5G22630.1	21798944
AT5G22630.1	TraesCS2B01G308400.1	AT5G22630.1	21798944
AT5G22630.1	TraesCS2B01G308500.1	AT5G22630.1	21798944
AT5G22630.1	TraesCS2D01G289900.2	AT5G22630.1	21798944
AT5G22630.1	TraesCS2D01G290000.1	AT5G22630.1	21798944
AT5G22630.1	TraesCS5A01G370200.1	AT5G22630.1	21798944
AT5G22630.1	TraesCS5B01G372500.1	AT5G22630.1	21798944
AT5G22630.1	TraesCS5D01G379700.1	AT5G22630.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G290000.1	Wheat	plastid	99.03	99.03
TraesCS2B01G308500.1	Wheat	plastid	99.03	99.03
HORVU2Hr1G072210.1	Barley	cytosol, mitochondrion, plastid	76.33	89.27
Zm00001d025333_P001	Maize	plastid	88.89	87.83
Zm00001d003830_P001	Maize	plastid	90.1	87.56
EES10725	Sorghum	plastid	89.61	85.88
Os04t0406600-01	Rice	plastid	89.37	84.86
VIT_06s0061g01300.t01	Wine grape	mitochondrion, plastid	73.67	74.21
TraesCS2A01G291900.1	Wheat	plastid	81.88	72.9
TraesCS5A01G370200.1	Wheat	plastid	73.91	72.51
AT1G08250.1	Thale cress	plastid	71.01	71.19
CDY06307	Canola	cytosol	67.63	71.07
KRH26581	Soybean	plastid	72.46	70.59
Bra031620.1-P	Field mustard	cytosol	67.15	70.56
KRH22725	Soybean	plastid	71.98	70.28
Solyc11g066890.1.1	Tomato	plastid	71.98	69.79
Bra034372.1-P	Field mustard	plastid	69.81	69.14
CDY30526	Canola	plastid	69.81	69.14
PGSC0003DMT400068261	Potato	plastid	72.22	69.05
PGSC0003DMT400018339	Potato	plastid	72.22	69.05
Solyc06g074530.1.1	Tomato	plastid	71.98	68.82
AT2G27820.1	Thale cress	plastid	69.81	68.16
CDX77139	Canola	plastid	70.05	68.08
GSMUA_Achr10P...	Banana	plastid	34.06	67.79
CDY22691	Canola	cytosol	68.12	67.46
KRH25168	Soybean	plastid	69.32	67.06
KRH30513	Soybean	plastid	69.08	66.82
CDY72678	Canola	plastid	65.46	64.68
AT3G44720.1	Thale cress	plastid	66.18	64.62
Bra031619.1-P	Field mustard	plastid	64.98	64.2
CDX92343	Canola	plastid	65.7	64.0
CDY26946	Canola	plastid	65.46	63.76
AT5G22630.1	Thale cress	plastid	65.46	63.76
CDY22692	Canola	plastid	64.49	63.72
CDY09152	Canola	plastid	64.98	63.29
Bra002423.1-P	Field mustard	plastid	65.94	63.19
CDY59281	Canola	plastid	64.73	63.06
Bra020203.1-P	Field mustard	plastid	64.98	62.27
Bra019468.1-P	Field mustard	plastid	57.97	62.18
CDY30932	Canola	plastid	57.25	61.4
CDX77841	Canola	plastid	56.76	60.72
TraesCS2A01G082200.1	Wheat	plastid	50.0	53.35
TraesCS4A01G106500.1	Wheat	plastid	48.79	50.63
TraesCS4A01G106600.1	Wheat	plastid	46.38	48.36
TraesCS1A01G188000.1	Wheat	plastid	36.23	37.69

Protein Annotations

KEGG:00400+4.2.1.51	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	InterPro:ACT_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0004664	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009094
GO:GO:0009987	InterPro:IPR001086	InterPro:IPR002912	PFAM:PF00800	ScanProsite:PS00857	ScanProsite:PS00858
PFscan:PS51171	PFscan:PS51671	PANTHER:PTHR21022	PANTHER:PTHR21022:SF13	InterPro:Preph_deHydtase	InterPro:Preph_deHydtase_CS
SUPFAM:SSF53850	SUPFAM:SSF55021	EnsemblPlantsGene:TraesCS2A01G292000	EnsemblPlants:TraesCS2A01G292000.1	TIGR:cd04905	TIGR:cd13631
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2A:+:502933862..502935106

Molecular Weight (calculated)

44397.2 Da

IEP (calculated)

7.649

GRAVY (calculated)

-0.020

Length

414 amino acids

Sequence
(BLAST)

001: MAAASFIKAP AGQNPRLAIH APGRGARVVR CSLGAAVGGR TEWLSNCAVL SSKVAALGPH SVNGHAAPAP APNGSVLDLI PVSGVNGVAK NLPAPLRIAD
101: LSPAPMHGSE LRVAYQGVPG AYSEKAAGKA YPGCDAIPCD QFEVAFQAVE LWIADRAVLP VENSLGGSIH RNYDLLLRHR LHIVGEVQLP VHHCLLALPG
201: VRKENITRVI SHPQALAQCE HTITRMGLNV VREAFDDTAG AAEYVANNGL RDTAAIASSR AAELYGMEIL ADGIQDDCGN VTRFVMLARE PIVPRTDRPF
301: KTSIVFAHDK EGTSVLFKVL SAFAFRDITL TKIESRPHRH RPIRLVDDAN RGTAKHFEYM FYVDFQASLA EPRAQNALAE VQEFTSFLRV LGSYPMDMTP
401: MTAGSSSTVT SSDS

Best Arabidopsis Sequence Match ( AT1G08250.1 )
(BLAST)

001: MKALSSSSPI LGASQPATAT ALIARSGRSE WQSSCAILTS KVISQEESES LPVPPVSGGV DHLNGHNSAA ARVPGMNLVP IEKSDSNPLV PQHRHNPLKP
101: LSMTDLSPAP MHGSNLRVAY QGVPGAYSEA AAGKAYPNCQ AIPCDQFEVA FQAVELWIAD RAVLPVENSL GGSIHRNYDL LLRHRLHIVG EVQLPVHHCL
201: LALPGVRKEF LTRVISHPQG LAQCEHTLTK LGLNVAREAV DDTAGAAEFI ASNNLRDTAA IASARAAEIY GLEILEDGIQ DDVSNVTRFV MLAREPIIPR
301: TDRPFKTSIV FAHEKGTSVL FKVLSAFAFR DISLTKIESR PNHNRPIRVV DDANVGTAKH FEYMFYVDFE ASMAEARAQN ALAEVQEFTS FLRVLGSYPM
401: DMTPWSPTSS TSS

Arabidopsis Description

ADT6Arogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A178W954]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.