Factsheet for TraesCS4A01G106600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G198200.1	Wheat	plastid	93.7	93.47
TraesCS4B01G197700.1	Wheat	plastid	93.2	92.96
TraesCS4A01G106500.1	Wheat	plastid	82.87	82.46
HORVU4Hr1G057130.1	Barley	cytosol	17.88	74.74
EER95050	Sorghum	plastid	67.76	69.87
Os03t0286200-01	Rice	plastid	69.27	68.92
TraesCS2A01G082200.1	Wheat	plastid	64.74	66.24
Zm00001d047755_P006	Maize	plastid	64.48	65.31
GSMUA_Achr10P...	Banana	cytosol	54.16	61.78
GSMUA_Achr6P15520_001	Banana	cytosol	51.89	60.59
Zm00001d028712_P007	Maize	plastid	64.74	60.05
CDX74036	Canola	plastid	53.65	56.2
CDY28030	Canola	plastid	52.9	55.85
Bra001262.1-P	Field mustard	plastid	53.15	55.67
CDY07984	Canola	plastid	52.9	55.41
Bra029665.1-P	Field mustard	plastid	52.9	55.41
VIT_06s0004g03430.t01	Wine grape	plastid	53.9	55.15
CDY35951	Canola	plastid	52.64	55.15
AT3G07630.3	Thale cress	plastid	52.9	55.12
KRH24944	Soybean	plastid	42.57	54.52
KRG89060	Soybean	plastid	52.64	54.29
PGSC0003DMT400065276	Potato	plastid	53.9	54.04
Solyc11g072520.1.1	Tomato	plastid	52.14	52.67
TraesCS2A01G292000.1	Wheat	plastid	48.36	46.38
TraesCS5A01G370200.1	Wheat	plastid	46.85	44.08
TraesCS2A01G291900.1	Wheat	plastid	47.86	40.86
TraesCS1A01G188000.1	Wheat	plastid	34.76	34.67

Protein Annotations

KEGG:00400+4.2.1.51	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	GO:GO:0003674	GO:GO:0003824
GO:GO:0004664	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009094	GO:GO:0009987
InterPro:IPR001086	PFAM:PF00800	ScanProsite:PS00857	ScanProsite:PS00858	PFscan:PS51171	PANTHER:PTHR21022
PANTHER:PTHR21022:SF3	InterPro:Preph_deHydtase	InterPro:Preph_deHydtase_CS	SUPFAM:SSF53850	SUPFAM:SSF55021	EnsemblPlantsGene:TraesCS4A01G106600
EnsemblPlants:TraesCS4A01G106600.1	TIGR:cd04905	TIGR:cd13631	SEG:seg	:	:

Description

No Description!

Coordinates

chr4A:+:121488491..121491754

Molecular Weight (calculated)

43414.1 Da

IEP (calculated)

7.275

GRAVY (calculated)

-0.111

Length

397 amino acids

Sequence
(BLAST)

001: MASMTTPRLP FFPARARSAA AAFSSLSSSP LQCCPVKRTS FTNTNSAPLL FASRPGAPLA DGWSADLNRR RASAMPVADS PLPAYSDPHA LPLPLTSADL
101: MESGGEGLKV AYQGFPGAYS ESAAKKAYPH CQTVPCEHFD TAFQAVENCT VDRAVLPLEN TLGGSIHRNY DLLLRHKLHI VGDVRLAVRH CLLANRGVKI
201: GNLRSVMSHP QALAQCEHTL TELGIEQRQA VDDTAGAAKL VTEQMLQDTG VVASSLAAEL YGLDILAENI QDEKENVTRF MMLARKPIVP QVDKPFKTSI
301: VFSLEDWKPA QLLKALAVFA LRDIDLTKIE SRPHKKRPFR VADDTFSTPV KYFNYLFYVD LEASMADPKA LKALGNLEEF APFVRVLGSY PTDVSEV

Best Arabidopsis Sequence Match ( AT1G08250.1 )
(BLAST)

001: MKALSSSSPI LGASQPATAT ALIARSGRSE WQSSCAILTS KVISQEESES LPVPPVSGGV DHLNGHNSAA ARVPGMNLVP IEKSDSNPLV PQHRHNPLKP
101: LSMTDLSPAP MHGSNLRVAY QGVPGAYSEA AAGKAYPNCQ AIPCDQFEVA FQAVELWIAD RAVLPVENSL GGSIHRNYDL LLRHRLHIVG EVQLPVHHCL
201: LALPGVRKEF LTRVISHPQG LAQCEHTLTK LGLNVAREAV DDTAGAAEFI ASNNLRDTAA IASARAAEIY GLEILEDGIQ DDVSNVTRFV MLAREPIIPR
301: TDRPFKTSIV FAHEKGTSVL FKVLSAFAFR DISLTKIESR PNHNRPIRVV DDANVGTAKH FEYMFYVDFE ASMAEARAQN ALAEVQEFTS FLRVLGSYPM
401: DMTPWSPTSS TSS

Arabidopsis Description

ADT6Arogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A178W954]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.