CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra029665.1-P	Field mustard	plastid	98.42	98.42
CDY28030	Canola	plastid	96.83	97.61
AT3G07630.3	Thale cress	plastid	89.97	89.5
CDX74036	Canola	plastid	89.45	89.45
CDY07984	Canola	plastid	88.92	88.92
VIT_06s0004g03430.t01	Wine grape	plastid	73.09	71.39
GSMUA_Achr10P...	Banana	cytosol	64.91	70.69
KRG89060	Soybean	plastid	70.98	69.87
GSMUA_Achr6P15520_001	Banana	cytosol	62.27	69.41
KRH24944	Soybean	plastid	56.73	69.35
PGSC0003DMT400065276	Potato	plastid	69.66	66.67
Solyc11g072520.1.1	Tomato	plastid	67.55	65.14
TraesCS2B01G096300.1	Wheat	plastid	62.53	62.37
TraesCS2D01G080100.1	Wheat	plastid	62.8	62.3
Os07t0694600-01	Rice	plastid	59.37	61.81
TraesCS2A01G082200.1	Wheat	plastid	62.53	61.08
EER95050	Sorghum	plastid	61.21	60.26
Os03t0286200-01	Rice	plastid	60.95	57.89
TraesCS4D01G198400.1	Wheat	plastid	60.69	57.64
TraesCS4A01G106500.1	Wheat	plastid	60.69	57.64
HORVU4Hr1G057140.3	Barley	plastid	60.42	57.39
Zm00001d047755_P006	Maize	plastid	57.52	55.61
CDY21012	Canola	mitochondrion	55.41	54.83
CDY31213	Canola	mitochondrion	55.15	54.71
TraesCS4B01G197700.1	Wheat	plastid	55.94	53.27
TraesCS4D01G198200.1	Wheat	plastid	55.41	52.76
HORVU2Hr1G013500.1	Barley	nucleus	56.46	52.71
TraesCS4A01G106600.1	Wheat	plastid	55.15	52.64
CDY06307	Canola	cytosol	54.62	52.54
CDX88512	Canola	plastid	17.41	52.38
CDY30526	Canola	plastid	56.46	51.2
Zm00001d028712_P007	Maize	plastid	56.99	50.47
CDX77139	Canola	plastid	56.46	50.23
CDY22691	Canola	cytosol	54.88	49.76
HORVU4Hr1G057130.1	Barley	cytosol	12.4	49.47
CDY72678	Canola	plastid	53.3	48.21
CDY59281	Canola	plastid	53.56	47.76
CDY09152	Canola	plastid	53.56	47.76
CDY22692	Canola	plastid	52.77	47.73
CDY26946	Canola	plastid	53.3	47.53
CDX92343	Canola	plastid	53.3	47.53
CDX77841	Canola	plastid	45.65	44.7
CDY30932	Canola	plastid	45.12	44.3
CDX98196	Canola	extracellular	10.82	43.62
CDX75178	Canola	cytosol	7.65	42.03
CDY19368	Canola	cytosol	53.83	28.18

Protein Annotations

KEGG:00400+4.2.1.51	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	GO:A0A078HDT5	UniProt:A0A078HDT5
InterPro:ACT_dom	EnsemblPlants:CDY35951	ProteinID:CDY35951	ProteinID:CDY35951.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004664	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009073	GO:GO:0009094	GO:GO:0009507
GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0016829	GO:GO:0047769	EnsemblPlantsGene:GSBRNA2T00059505001
InterPro:IPR001086	InterPro:IPR002912	PFAM:PF00800	ScanProsite:PS00857	ScanProsite:PS00858	PFscan:PS51171
PFscan:PS51671	PANTHER:PTHR21022	PANTHER:PTHR21022:SF3	MetaCyc:PWY-7432	InterPro:Preph_deHydtase	InterPro:Preph_deHydtase_CS
SUPFAM:SSF53850	SUPFAM:SSF55021	UniPathway:UPA00121	UniParc:UPI0004EF0948	SEG:seg	:

Description

BnaA05g29990DArogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A078HDT5]

Coordinates

chrLK032364:+:103901..106435

Molecular Weight (calculated)

41574.7 Da

IEP (calculated)

7.065

GRAVY (calculated)

-0.135

Length

379 amino acids

Sequence
(BLAST)

001: MAVHAVRSPT THLHGGISGN LPPSNRNPNA VIRFGYGSSK RNRLVSLSAS LREGDGRGKE SSVRAVEVKK ILEDSPLLPK PLSSNQLAET VSNGSRVRVA
101: YQGVRGAYSE SAAEKAYPNC EAVPCEEFDT AFEAVERWLV DRAVLPIENS LGGSIHRNYD LLLRHNLHIV GEVKLAVRHC LLANHGVKLE DLRRVLSHPQ
201: ALAQCENTLT RLGLVREAVD DTAGAAKQIA FEDLSDAAAV ASAKAAEIYG LNIVAEDIQD DTDNVTRFLM LAREPIIPGT NRLFKTSIVF SLEEGPGVLF
301: KALAVFALRQ INLTKIESRP LRKNPLRASG GLKYFDYLFY VDFEASMADE VAQNALRHLE EFATFLRVLG SYPVDTTML

Best Arabidopsis Sequence Match ( AT3G07630.3 )
(BLAST)

001: MAMHTVRLSP ATQLHGGISS NLSPPNRKPN NSIVRYGCGS SKRFRIVTVL ASLRENDANG RDNSVRAMEV KKIFEDSPLL PKPLSSNQLT ESVSNGSRVR
101: VAYQGVRGAY SESAAEKAYP NCEAVPCEEF DTAFEAVERW LVDRAVLPIE NSLGGSIHRN YDLLLRHNLH IVGEVKLAVR HCLLANHGVN IEDLRRVLSH
201: PQALAQCENT LTKLGLVREA VDDTAGAAKQ IAFENLNDAA AVASEKAAKI YGLNIVAKDI QDDCDNVTRF LMLAREPIIP GTNRLFKTSI VFSLEEGPGV
301: LFKALAVFAL RQINLTKIES RPLRKHPLRA SGGLKYFDYL FYVDFEASMA DEVAQNALRH LEEFATFLRV LGSYPVDTTM L

Arabidopsis Description

ADT2Arogenate dehydratase/prephenate dehydratase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SSE7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.