Factsheet for Solyc11g072520.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400065276	Potato	plastid	94.4	93.69
VIT_06s0004g03430.t01	Wine grape	plastid	67.68	68.56
GSMUA_Achr10P...	Banana	cytosol	60.56	68.39
KRH24944	Soybean	plastid	53.94	68.39
AT3G07630.3	Thale cress	plastid	65.65	67.72
CDY28030	Canola	plastid	64.63	67.55
Bra029665.1-P	Field mustard	plastid	65.14	67.55
CDY35951	Canola	plastid	65.14	67.55
GSMUA_Achr6P15520_001	Banana	cytosol	57.76	66.76
KRG89060	Soybean	plastid	64.63	65.97
Bra001262.1-P	Field mustard	plastid	63.61	65.96
CDY07984	Canola	plastid	63.61	65.96
CDX74036	Canola	plastid	63.36	65.7
Os07t0694600-01	Rice	plastid	55.47	59.89
EER95050	Sorghum	plastid	58.02	59.22
TraesCS2B01G096300.1	Wheat	plastid	57.0	58.95
TraesCS2D01G080100.1	Wheat	plastid	57.0	58.64
TraesCS2A01G082200.1	Wheat	plastid	56.74	57.47
Os03t0286200-01	Rice	plastid	58.02	57.14
TraesCS4A01G106500.1	Wheat	plastid	56.23	55.39
TraesCS4D01G198400.1	Wheat	plastid	56.23	55.39
HORVU4Hr1G057140.3	Barley	plastid	56.23	55.39
Zm00001d047755_P006	Maize	plastid	53.69	53.83
TraesCS4B01G197700.1	Wheat	plastid	52.93	52.26
TraesCS4D01G198200.1	Wheat	plastid	52.93	52.26
TraesCS4A01G106600.1	Wheat	plastid	52.67	52.14
Solyc02g080620.2.1	Tomato	plastid	52.42	51.5
Solyc11g066890.1.1	Tomato	plastid	54.71	50.35
HORVU2Hr1G013500.1	Barley	nucleus	51.4	49.75
Solyc06g074530.1.1	Tomato	plastid	54.71	49.65
Zm00001d028712_P007	Maize	plastid	53.44	49.07
HORVU4Hr1G057130.1	Barley	cytosol	10.18	42.11

Protein Annotations

KEGG:00400+4.2.1.51	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	InterPro:ACT_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0004664	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009073	GO:GO:0009094
GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0016829	GO:GO:0047769
InterPro:IPR001086	InterPro:IPR002912	UniProt:K4DAV9	PFAM:PF00800	ScanProsite:PS00857	ScanProsite:PS00858
PFscan:PS51171	PFscan:PS51671	PANTHER:PTHR21022	PANTHER:PTHR21022:SF3	InterPro:Preph_deHydtase	InterPro:Preph_deHydtase_CS
SUPFAM:SSF53850	SUPFAM:SSF55021	EnsemblPlantsGene:Solyc11g072520.1	EnsemblPlants:Solyc11g072520.1.1	UniParc:UPI0002769CB7	SEG:seg

Description

Arogenate dehydratase/prephenate dehydratase 2, chloroplastic [Source:Projected from Arabidopsis thaliana (AT3G07630) UniProtKB/Swiss-Prot;Acc:Q9SSE7]

Coordinates

chr11:+:55709185..55715206

Molecular Weight (calculated)

43376.0 Da

IEP (calculated)

8.791

GRAVY (calculated)

-0.206

Length

393 amino acids

Sequence
(BLAST)

001: MAATIVRSPK LSLSLSTPES TTSNLPSLNQ SFFTPLPKRR RCISIYACSA GDQSNSAFGG EIKKGQAIEL NKVNDENPYE FNAKDSPNPL PRPLTSADLN
101: NMASQGSRLR VAYQGVRGAY SESAAEKAYP NCEAVPCEQF DTAFEAVERW LVDRAVLPIE NSLGGSIHRN YDLLLRHRLH IVGEVKLAVR HCLLANNGVK
201: IEDLKRVLSH PQALAQCENT LTKLGLVREA VDDTAGAAKY IAFSKLKDAG AVASLAASRI YGLNVLAQDI QDDSDNVTRF LMLAREPIIP RTDKPFKTSV
301: VFSLDEGPGV LFKALAVFAM RNINLTKIES RPLQKQALKV LEDSADGFPK YFPYLFYVDF EASMADQRAQ NALGHLKQRI CYLFASFRKL PFG

Best Arabidopsis Sequence Match ( AT3G07630.3 )
(BLAST)

001: MAMHTVRLSP ATQLHGGISS NLSPPNRKPN NSIVRYGCGS SKRFRIVTVL ASLRENDANG RDNSVRAMEV KKIFEDSPLL PKPLSSNQLT ESVSNGSRVR
101: VAYQGVRGAY SESAAEKAYP NCEAVPCEEF DTAFEAVERW LVDRAVLPIE NSLGGSIHRN YDLLLRHNLH IVGEVKLAVR HCLLANHGVN IEDLRRVLSH
201: PQALAQCENT LTKLGLVREA VDDTAGAAKQ IAFENLNDAA AVASEKAAKI YGLNIVAKDI QDDCDNVTRF LMLAREPIIP GTNRLFKTSI VFSLEEGPGV
301: LFKALAVFAL RQINLTKIES RPLRKHPLRA SGGLKYFDYL FYVDFEASMA DEVAQNALRH LEEFATFLRV LGSYPVDTTM L

Arabidopsis Description

ADT2Arogenate dehydratase/prephenate dehydratase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SSE7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.