CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH24944	Soybean	plastid	76.88	95.48
GSMUA_Achr10P...	Banana	cytosol	67.27	74.43
VIT_06s0004g03430.t01	Wine grape	plastid	73.77	73.2
GSMUA_Achr6P15520_001	Banana	cytosol	63.12	71.47
CDY28030	Canola	plastid	69.35	71.01
CDY35951	Canola	plastid	69.87	70.98
Bra029665.1-P	Field mustard	plastid	69.61	70.71
AT3G07630.3	Thale cress	plastid	69.35	70.08
CDX74036	Canola	plastid	68.83	69.92
Bra001262.1-P	Field mustard	plastid	68.57	69.66
CDY07984	Canola	plastid	67.79	68.87
PGSC0003DMT400065276	Potato	plastid	68.83	66.92
Solyc11g072520.1.1	Tomato	plastid	65.97	64.63
EER95050	Sorghum	plastid	61.82	61.82
Os07t0694600-01	Rice	plastid	58.44	61.81
TraesCS2D01G080100.1	Wheat	plastid	60.26	60.73
TraesCS2B01G096300.1	Wheat	plastid	59.48	60.26
Os03t0286200-01	Rice	plastid	61.82	59.65
TraesCS2A01G082200.1	Wheat	plastid	59.48	59.02
TraesCS4D01G198400.1	Wheat	plastid	60.26	58.15
TraesCS4A01G106500.1	Wheat	plastid	60.26	58.15
HORVU4Hr1G057140.3	Barley	plastid	59.74	57.64
Zm00001d047755_P006	Maize	plastid	58.44	57.4
KRH22575	Soybean	cytosol	37.4	56.03
KRH26772	Soybean	plastid	52.99	53.12
TraesCS4B01G197700.1	Wheat	plastid	54.81	53.02
TraesCS4D01G198200.1	Wheat	plastid	54.81	53.02
TraesCS4A01G106600.1	Wheat	plastid	54.29	52.64
HORVU4Hr1G057130.1	Barley	cytosol	12.99	52.63
HORVU2Hr1G013500.1	Barley	nucleus	54.55	51.72
Zm00001d028712_P007	Maize	plastid	57.14	51.4
KRH26581	Soybean	plastid	56.1	50.82
KRH22725	Soybean	plastid	55.84	50.71
KRH25168	Soybean	plastid	54.81	49.3
KRH02054	Soybean	plastid	50.65	48.51
KRH30513	Soybean	plastid	53.77	48.36
KRH36465	Soybean	plastid	50.13	47.77
KRG93965	Soybean	cytosol	9.35	43.9

Protein Annotations

KEGG:00400+4.2.1.51	EntrezGene:100787387	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	InterPro:ACT_dom
EnsemblPlantsGene:GLYMA_U021400	GO:GO:0003674	GO:GO:0003824	GO:GO:0004664	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058
GO:GO:0009073	GO:GO:0009094	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987
GO:GO:0016829	GO:GO:0047769	UniProt:I1LKB8	InterPro:IPR001086	InterPro:IPR002912	EnsemblPlants:KRG89060
ProteinID:KRG89060	ProteinID:KRG89060.1	PFAM:PF00800	ScanProsite:PS00857	ScanProsite:PS00858	PFscan:PS51171
PFscan:PS51671	PANTHER:PTHR21022	PANTHER:PTHR21022:SF3	MetaCyc:PWY-7432	InterPro:Preph_deHydtase	InterPro:Preph_deHydtase_CS
SUPFAM:SSF53850	SUPFAM:SSF55021	UniParc:UPI000233D572	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chrscaffold_21:+:3460088..3465226

Molecular Weight (calculated)

42742.7 Da

IEP (calculated)

8.037

GRAVY (calculated)

-0.355

Length

385 amino acids

Sequence
(BLAST)

001: MAASRIVAHP PPYPHRQSPP SDAPPSLNLT LNPKRYRNLG IRASLRGHEE KNKNDLADKP HSVELRATST PDDVVSRDLL SLPRPLSSTQ LSASVSDSSR
101: LRVAYQGVRG AYSESAAQKA YPNCEAVPCE QFDTAFDAVE RWLVDRAVLP IENSLGGSIH RNYDLLLRHS LHIVGEVNFA VRHCLMANHG VKREDLKRVL
201: SHPQALAQCE NTLTKFGLVR EAVDDTAGAA KHVAYHKLQD AGAVASSAAA KIYGLNILDQ DIQDDSDNVT RFLMLAREPM IPGTDRRFKT SIVFSLEEGP
301: GILFKALAVF ALRQINLTKI ESRPLRNQPL RADDSNNSKY FDYLFYVDFE ASMAEQSAQN ALRHLKEFAT FLRVLGSYPV DTSLT

Best Arabidopsis Sequence Match ( AT3G07630.3 )
(BLAST)

001: MAMHTVRLSP ATQLHGGISS NLSPPNRKPN NSIVRYGCGS SKRFRIVTVL ASLRENDANG RDNSVRAMEV KKIFEDSPLL PKPLSSNQLT ESVSNGSRVR
101: VAYQGVRGAY SESAAEKAYP NCEAVPCEEF DTAFEAVERW LVDRAVLPIE NSLGGSIHRN YDLLLRHNLH IVGEVKLAVR HCLLANHGVN IEDLRRVLSH
201: PQALAQCENT LTKLGLVREA VDDTAGAAKQ IAFENLNDAA AVASEKAAKI YGLNIVAKDI QDDCDNVTRF LMLAREPIIP GTNRLFKTSI VFSLEEGPGV
301: LFKALAVFAL RQINLTKIES RPLRKHPLRA SGGLKYFDYL FYVDFEASMA DEVAQNALRH LEEFATFLRV LGSYPVDTTM L

Arabidopsis Description

ADT2Arogenate dehydratase/prephenate dehydratase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SSE7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.