Factsheet for HORVU4Hr1G057130.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G198200.1	Wheat	plastid	76.84	18.34
TraesCS4A01G106600.1	Wheat	plastid	74.74	17.88
TraesCS4B01G197700.1	Wheat	plastid	74.74	17.84
HORVU4Hr1G057140.3	Barley	plastid	73.68	17.54
Os03t0286200-01	Rice	plastid	67.37	16.04
EER95050	Sorghum	plastid	62.11	15.32
HORVU2Hr1G013500.1	Barley	nucleus	65.26	15.27
GSMUA_Achr10P...	Banana	cytosol	54.74	14.94
Zm00001d047755_P006	Maize	plastid	61.05	14.8
GSMUA_Achr6P15520_001	Banana	cytosol	51.58	14.41
Zm00001d028712_P007	Maize	plastid	63.16	14.02
KRG89060	Soybean	plastid	52.63	12.99
VIT_06s0004g03430.t01	Wine grape	plastid	52.63	12.89
PGSC0003DMT400065276	Potato	plastid	52.63	12.63
CDY28030	Canola	plastid	49.47	12.5
HORVU2Hr1G072210.1	Barley	cytosol, mitochondrion, plastid	46.32	12.43
CDY35951	Canola	plastid	49.47	12.4
Bra029665.1-P	Field mustard	plastid	49.47	12.4
AT3G07630.3	Thale cress	plastid	49.47	12.34
Bra001262.1-P	Field mustard	plastid	48.42	12.14
CDY07984	Canola	plastid	48.42	12.14
CDX74036	Canola	plastid	48.42	12.14
HORVU5Hr1G092190.1	Barley	plastid	47.37	10.56
Solyc11g072520.1.1	Tomato	plastid	42.11	10.18
HORVU2Hr1G072180.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	47.37	9.78
HORVU1Hr1G048860.1	Barley	plastid	32.63	7.73
HORVU1Hr1G023740.1	Barley	plastid	7.37	4.67
HORVU3Hr1G041870.1	Barley	plastid	6.32	4.35
HORVU6Hr1G060430.1	Barley	plastid	4.21	3.01
KRH24944	Soybean	plastid	8.42	2.58

Protein Annotations

EnsemblPlants:HORVU4Hr1G057130.1	EnsemblPlantsGene:HORVU4Hr1G057130	Gene3D:3.30.70.260	PANTHER:PTHR21022	PANTHER:PTHR21022:SF3	SUPFAM:SSF55021
UniParc:UPI000B484B06	UniProt:A0A287P6H3	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:479982907..479983588

Molecular Weight (calculated)

10952.0 Da

IEP (calculated)

9.821

GRAVY (calculated)

-0.492

Length

95 amino acids

Sequence
(BLAST)

1: TKLDSVWGET FPLWLGRPPW GSLSPKIESR PHKKRPFRVA DDTFSTPVKY FNYLFYVDLE ASMADPKTRN ALRNLKEFAP FVRVLGSYPT DVSEA

Best Arabidopsis Sequence Match ( AT1G11790.1 )
(BLAST)

001: MALRCFPIWV CPQTTHHRSP LMGLAEFDAD KRRRFCLWEC SSSASQRAVT AIEGEIPFSR ELKKSSDELG LTQETQSLSF HRDLSMLPKP LTANSLYSSD
101: GDDSKVRISF QGIPGAYSET AALKAFPNCE TVPCEQFEAA FQAVELWLVD KAVLPIENSV GGSIHRNYDL LLRHRLHIVQ EVHLPVNHCL LGVPGVKKED
201: IKCVLSHPQA LDQCVNSLNN LGIQRISAKD TATAAQTVSS SGKIDVGAIA SVRAANIYGL DILAENIQDD VNNVTRFLIL AREPMIPRTD RPYKTSIVFS
301: LEEGPGVLFK ALAVFALRSI NLSKIESRPQ RRRPLRVVDG SNNGSAKYFD YLFYIDFEAS MADTRAQHAL GHLQEFASFI RILGCYPMDL VR

Arabidopsis Description

ADT1Arogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A178W336]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.