Factsheet for HORVU5Hr1G092190.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G072180.1
HORVU2Hr1G072210.1
HORVU5Hr1G092190.1
HORVU6Hr1G091500.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G44720.1	HORVU2Hr1G072180.1	AT3G44720.1	21798944
AT3G44720.1	HORVU2Hr1G072210.1	AT3G44720.1	21798944
AT3G44720.1	HORVU5Hr1G092190.1	AT3G44720.1	21798944
AT3G44720.1	HORVU6Hr1G091500.1	AT3G54826.1	21798944
AT5G22630.1	HORVU2Hr1G072180.1	AT3G44720.1	21798944
AT5G22630.1	HORVU2Hr1G072210.1	AT3G44720.1	21798944
AT5G22630.1	HORVU5Hr1G092190.1	AT3G44720.1	21798944
AT5G22630.1	HORVU2Hr1G072180.1	AT5G22630.1	21798944
AT5G22630.1	HORVU2Hr1G072210.1	AT5G22630.1	21798944
AT5G22630.1	HORVU5Hr1G092190.1	AT5G22630.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G372500.1	Wheat	plastid	94.6	95.95
TraesCS5A01G370200.1	Wheat	plastid	94.6	95.5
TraesCS5D01G379700.1	Wheat	plastid	94.6	95.27
Zm00001d005351_P001	Maize	plastid	80.05	80.81
HORVU2Hr1G072210.1	Barley	cytosol, mitochondrion, plastid	65.96	79.38
Os09t0565700-01	Rice	plastid	74.41	79.05
EER96348	Sorghum	plastid	80.99	78.77
Os09t0566050-00	Rice	plastid	75.12	78.62
VIT_06s0061g01300.t01	Wine grape	mitochondrion, plastid	70.89	73.48
Solyc11g066890.1.1	Tomato	plastid	71.36	71.19
CDY06307	Canola	cytosol	65.73	71.07
AT1G08250.1	Thale cress	plastid	68.54	70.7
Solyc06g074530.1.1	Tomato	plastid	71.6	70.44
Bra034372.1-P	Field mustard	plastid	69.01	70.33
CDY30526	Canola	plastid	69.01	70.33
Bra031620.1-P	Field mustard	cytosol	65.02	70.3
PGSC0003DMT400018339	Potato	plastid	71.36	70.21
KRH26581	Soybean	plastid	69.72	69.88
KRH22725	Soybean	plastid	69.48	69.81
PGSC0003DMT400068261	Potato	plastid	70.89	69.75
AT2G27820.1	Thale cress	plastid	69.01	69.34
CDX77139	Canola	plastid	69.01	69.01
KRH30513	Soybean	plastid	68.78	68.46
KRH25168	Soybean	plastid	68.54	68.22
CDY22691	Canola	cytosol	66.9	68.18
CDY72678	Canola	plastid	64.55	65.63
Bra031619.1-P	Field mustard	plastid	64.08	65.16
AT3G44720.1	Thale cress	plastid	64.55	64.86
HORVU2Hr1G072180.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	69.95	64.78
CDY22692	Canola	plastid	63.62	64.68
AT5G22630.1	Thale cress	plastid	64.32	64.47
CDX92343	Canola	plastid	64.32	64.47
CDY09152	Canola	plastid	64.08	64.24
CDY59281	Canola	plastid	63.85	64.0
CDY26946	Canola	plastid	63.85	64.0
Bra002423.1-P	Field mustard	plastid	64.32	63.43
Bra020203.1-P	Field mustard	plastid	64.08	63.19
Bra019468.1-P	Field mustard	plastid	56.34	62.18
CDY30932	Canola	plastid	55.63	61.4
CDX77841	Canola	plastid	55.63	61.24
HORVU4Hr1G057140.3	Barley	plastid	46.95	50.13
HORVU2Hr1G013500.1	Barley	nucleus	45.77	48.03
HORVU4Hr1G057130.1	Barley	cytosol	10.56	47.37
HORVU1Hr1G048860.1	Barley	plastid	35.68	37.91
HORVU3Hr1G041870.1	Barley	plastid	10.33	31.88
HORVU6Hr1G060430.1	Barley	plastid	9.62	30.83
HORVU1Hr1G023740.1	Barley	plastid	10.33	29.33

Protein Annotations

KEGG:00400+4.2.1.51	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	InterPro:ACT_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0004664	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009073	GO:GO:0009094
GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0016829	GO:GO:0047769
EnsemblPlantsGene:HORVU5Hr1G092190	EnsemblPlants:HORVU5Hr1G092190.1	InterPro:IPR001086	InterPro:IPR002912	UniProt:M0X229	PFAM:PF00800
ScanProsite:PS00857	ScanProsite:PS00858	PFscan:PS51171	PFscan:PS51671	PANTHER:PTHR21022	PANTHER:PTHR21022:SF13
InterPro:Preph_deHydtase	InterPro:Preph_deHydtase_CS	SUPFAM:SSF53850	SUPFAM:SSF55021	UniParc:UPI000295131B	SEG:seg

Description

Arogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:M0X229]

Coordinates

chrchr5H:+:587764055..587766691

Molecular Weight (calculated)

45466.0 Da

IEP (calculated)

6.885

GRAVY (calculated)

-0.113

Length

426 amino acids

Sequence
(BLAST)

001: MEAAAAIRST AAPRMPLAGR SRGPGTAAAR AIPGSRGDWQ TACAILSSTN DTPTPPAPKV NGQNSNKLAA PAIPGSEDAA FSLDLVPAAG AGNLPRPLSI
101: SDLSPAPLHG AQLRVAYQGV PGAYSEAAAG KAYPGCEAIP CDQFEVAFQA VELWIADRAV LPVENSLGGS IHRNYDLLLR HRLHIVGEVQ LPVHHCLLAL
201: PGVRRELLAR VISHPQALAQ CEHTLTRMGL NVAREAFDDT AGAAEHIAAH GLRDTAAIAS ARAAELYGLQ ILADGVQDDA GNVTRFVMLA REPIIPRTDR
301: PFKTSIVLAH DREGTSVLFK VLSAFAFRDI SLTKIESRPH RHRPIRLVDD ANIGTAKHFE YMFYIDFQAS MADVRAQNAL AEIQEFTSFL RVLGSYPMDM
401: TPWDAAPSST SSSGSPSSSS DQQQRG

Best Arabidopsis Sequence Match ( AT1G08250.1 )
(BLAST)

001: MKALSSSSPI LGASQPATAT ALIARSGRSE WQSSCAILTS KVISQEESES LPVPPVSGGV DHLNGHNSAA ARVPGMNLVP IEKSDSNPLV PQHRHNPLKP
101: LSMTDLSPAP MHGSNLRVAY QGVPGAYSEA AAGKAYPNCQ AIPCDQFEVA FQAVELWIAD RAVLPVENSL GGSIHRNYDL LLRHRLHIVG EVQLPVHHCL
201: LALPGVRKEF LTRVISHPQG LAQCEHTLTK LGLNVAREAV DDTAGAAEFI ASNNLRDTAA IASARAAEIY GLEILEDGIQ DDVSNVTRFV MLAREPIIPR
301: TDRPFKTSIV FAHEKGTSVL FKVLSAFAFR DISLTKIESR PNHNRPIRVV DDANVGTAKH FEYMFYVDFE ASMAEARAQN ALAEVQEFTS FLRVLGSYPM
401: DMTPWSPTSS TSS

Arabidopsis Description

ADT6Arogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A178W954]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.