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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU6Hr1G060430.1 Barley plastid 89.86 93.23
HORVU1Hr1G023740.1 Barley plastid 91.3 84.0
CDX75178 Canola cytosol 18.84 37.68
CDX98196 Canola extracellular 19.57 28.72
HORVU4Hr1G057140.3 Barley plastid 34.78 12.03
HORVU5Hr1G092190.1 Barley plastid 31.88 10.33
HORVU1Hr1G048860.1 Barley plastid 26.81 9.23
HORVU2Hr1G072180.1 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole 29.71 8.91
HORVU2Hr1G072210.1 Barley cytosol, mitochondrion, plastid 22.46 8.76
HORVU2Hr1G013500.1 Barley nucleus 23.19 7.88
HORVU4Hr1G057130.1 Barley cytosol 4.35 6.32
Protein Annotations
EnsemblPlants:HORVU3Hr1G041870.1EnsemblPlantsGene:HORVU3Hr1G041870Gene3D:3.40.190.10PANTHER:PTHR21022PANTHER:PTHR21022:SF3SEG:seg
UniParc:UPI000B46D450UniProt:A0A287KVM6MapMan:35.2:::
Description
No Description!
Coordinates
chrchr3H:-:262891519..262892158
Molecular Weight (calculated)
14175.7 Da
IEP (calculated)
8.490
GRAVY (calculated)
-0.238
Length
138 amino acids
Sequence
(BLAST)
001: MTASSSSSLR IPAPTHHPAA GARPLRLPFH SVSVRPRRSP VSASASPQQA PGPGDGDRAN GRTGVPVPLP FSFDAAIALP RPLTSADLMG EASGEGLKVA
101: YQGCPGAYSE AAAKKAYASC ETLPCEYFET AFQVPPAS
Best Arabidopsis Sequence Match ( AT2G27820.1 )
(BLAST)
001: MRTLLPSHTP ATVTTAARRR HVIHCAGKRS DSFSINSSSS DWQSSCAILS SKVNSQEQSE SLSSNSNGSS SYHVSAVNGH NNGAGVSDLN LVPFNNNQSI
101: QSKKPLSISD LSPAPMHGSN LRVAYQGVPG AYSEAAAGKA YPNCQAIPCD QFEVAFQAVE LWIADRAVLP VENSLGGSIH RNYDLLLRHR LHIVGEVQLP
201: VHHCLIALPG VRKEFLTRVI SHPQGLAQCE HTLTKLGLNV AREAVDDTAG AAEFIAANNI RDTAAIASAR AAEIYGLEIL EDGIQDDASN VTRFVMLARE
301: PIIPRTDRPF KTSIVFAHEK GTCVLFKVLS AFAFRNISLT KIESRPNHNV PIRLVDEANV GTAKHFEYMF YIDFEASMAE SRAQNALSEV QEFTSFLRVL
401: GSYPMDMTSW SPSSSSSSSS TFSL
Arabidopsis Description
ADT3Arogenate dehydratase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUY3]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.