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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU3Hr1G041870.1 Barley plastid 84.0 91.3
HORVU6Hr1G060430.1 Barley plastid 79.33 89.47
CDX75178 Canola cytosol 16.67 36.23
CDX98196 Canola extracellular 17.33 27.66
HORVU4Hr1G057140.3 Barley plastid 32.0 12.03
HORVU5Hr1G092190.1 Barley plastid 29.33 10.33
HORVU1Hr1G048860.1 Barley plastid 26.67 9.98
HORVU2Hr1G072180.1 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole 27.33 8.91
HORVU2Hr1G013500.1 Barley nucleus 24.0 8.87
HORVU2Hr1G072210.1 Barley cytosol, mitochondrion, plastid 20.67 8.76
HORVU4Hr1G057130.1 Barley cytosol 4.67 7.37
Protein Annotations
EnsemblPlants:HORVU1Hr1G023740.1EnsemblPlantsGene:HORVU1Hr1G023740PANTHER:PTHR21022PANTHER:PTHR21022:SF3SEG:segUniParc:UPI000B4672B1
UniProt:A0A287EXK2MapMan:35.2::::
Description
No Description!
Coordinates
chrchr1H:-:105458147..105459064
Molecular Weight (calculated)
15465.3 Da
IEP (calculated)
7.454
GRAVY (calculated)
-0.159
Length
150 amino acids
Sequence
(BLAST)
001: MTASSSSSLQ IPAPTHHPAA GARPLQLPFH SVSVRPRRSP VSASASPQQA RGPGDGDHAN GRTGVPVPFS RDATIALPRP LTSADLMGEA SGEGLKVPSQ
101: GCPGAYSEAA AKKAYPSCET VPCEYFETAF QVPPASMLLI IITDACLLSN
Best Arabidopsis Sequence Match ( AT2G27820.1 )
(BLAST)
001: MRTLLPSHTP ATVTTAARRR HVIHCAGKRS DSFSINSSSS DWQSSCAILS SKVNSQEQSE SLSSNSNGSS SYHVSAVNGH NNGAGVSDLN LVPFNNNQSI
101: QSKKPLSISD LSPAPMHGSN LRVAYQGVPG AYSEAAAGKA YPNCQAIPCD QFEVAFQAVE LWIADRAVLP VENSLGGSIH RNYDLLLRHR LHIVGEVQLP
201: VHHCLIALPG VRKEFLTRVI SHPQGLAQCE HTLTKLGLNV AREAVDDTAG AAEFIAANNI RDTAAIASAR AAEIYGLEIL EDGIQDDASN VTRFVMLARE
301: PIIPRTDRPF KTSIVFAHEK GTCVLFKVLS AFAFRNISLT KIESRPNHNV PIRLVDEANV GTAKHFEYMF YIDFEASMAE SRAQNALSEV QEFTSFLRVL
401: GSYPMDMTSW SPSSSSSSSS TFSL
Arabidopsis Description
ADT3Arogenate dehydratase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUY3]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.