Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX98196 | Canola | extracellular | 78.26 | 57.45 |
| CDX88512 | Canola | plastid | 40.58 | 22.22 |
| HORVU3Hr1G041870.1 | Barley | plastid | 37.68 | 18.84 |
| HORVU6Hr1G060430.1 | Barley | plastid | 36.23 | 18.8 |
| HORVU1Hr1G023740.1 | Barley | plastid | 36.23 | 16.67 |
| CDY06307 | Canola | cytosol | 53.62 | 9.39 |
| CDY30526 | Canola | plastid | 55.07 | 9.09 |
| CDY30932 | Canola | plastid | 50.72 | 9.07 |
| CDX77841 | Canola | plastid | 50.72 | 9.04 |
| CDX77139 | Canola | plastid | 55.07 | 8.92 |
| CDY22691 | Canola | cytosol | 50.72 | 8.37 |
| CDY22692 | Canola | plastid | 50.72 | 8.35 |
| CDY72678 | Canola | plastid | 50.72 | 8.35 |
| CDY26946 | Canola | plastid | 49.28 | 8.0 |
| CDY09152 | Canola | plastid | 49.28 | 8.0 |
| CDY59281 | Canola | plastid | 49.28 | 8.0 |
| CDX92343 | Canola | plastid | 49.28 | 8.0 |
| CDY28030 | Canola | plastid | 42.03 | 7.71 |
| CDY35951 | Canola | plastid | 42.03 | 7.65 |
| CDY07984 | Canola | plastid | 42.03 | 7.65 |
| CDX74036 | Canola | plastid | 42.03 | 7.65 |
| CDY31213 | Canola | mitochondrion | 39.13 | 7.07 |
| CDY21012 | Canola | mitochondrion | 39.13 | 7.05 |
| CDY19368 | Canola | cytosol | 42.03 | 4.01 |
Protein Annotations
| EnsemblPlants:CDX75178 | EnsemblPlantsGene:GSBRNA2T00119101001 | PANTHER:PTHR21022 | PANTHER:PTHR21022:SF14 | ProteinID:CDX75178 | ProteinID:CDX75178.1 |
| UniParc:UPI0004EBECAC | MapMan:35.1 | : | : | : | : |
Description
BnaC09g25040D
Coordinates
chrLK031803:+:2197351..2198622
Molecular Weight (calculated)
7078.3 Da
IEP (calculated)
6.488
GRAVY (calculated)
0.029
Length
69 amino acids
Sequence
(BLAST)
(BLAST)
1: MHGSNPGVAY QAIPGAYSEA AAGKAYPYCQ VFPCDQFEVS FQAGIVDRQA LTPGHRSSAM AAVGITAGS
001: MKALSSSSPI LGASQPATAT ALIARSGRSE WQSSCAILTS KVISQEESES LPVPPVSGGV DHLNGHNSAA ARVPGMNLVP IEKSDSNPLV PQHRHNPLKP
101: LSMTDLSPAP MHGSNLRVAY QGVPGAYSEA AAGKAYPNCQ AIPCDQFEVA FQAVELWIAD RAVLPVENSL GGSIHRNYDL LLRHRLHIVG EVQLPVHHCL
201: LALPGVRKEF LTRVISHPQG LAQCEHTLTK LGLNVAREAV DDTAGAAEFI ASNNLRDTAA IASARAAEIY GLEILEDGIQ DDVSNVTRFV MLAREPIIPR
301: TDRPFKTSIV FAHEKGTSVL FKVLSAFAFR DISLTKIESR PNHNRPIRVV DDANVGTAKH FEYMFYVDFE ASMAEARAQN ALAEVQEFTS FLRVLGSYPM
401: DMTPWSPTSS TSS
101: LSMTDLSPAP MHGSNLRVAY QGVPGAYSEA AAGKAYPNCQ AIPCDQFEVA FQAVELWIAD RAVLPVENSL GGSIHRNYDL LLRHRLHIVG EVQLPVHHCL
201: LALPGVRKEF LTRVISHPQG LAQCEHTLTK LGLNVAREAV DDTAGAAEFI ASNNLRDTAA IASARAAEIY GLEILEDGIQ DDVSNVTRFV MLAREPIIPR
301: TDRPFKTSIV FAHEKGTSVL FKVLSAFAFR DISLTKIESR PNHNRPIRVV DDANVGTAKH FEYMFYVDFE ASMAEARAQN ALAEVQEFTS FLRVLGSYPM
401: DMTPWSPTSS TSS
Arabidopsis Description
ADT6Arogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A178W954]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.