CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 5
nucleus 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra016813.1-P	Field mustard	mitochondrion	100.0	100.0
CDY31213	Canola	mitochondrion	96.87	97.12
AT1G11790.1	Thale cress	plastid	89.03	86.99
Solyc02g080620.2.1	Tomato	plastid	68.15	65.25
PGSC0003DMT400042492	Potato	plastid	67.62	64.75
VIT_10s0116g01670.t01	Wine grape	plastid	65.54	63.38
GSMUA_Achr8P15920_001	Banana	cytosol	51.7	60.92
KRH02054	Soybean	plastid	63.19	60.2
GSMUA_Achr4P23700_001	Banana	plastid	60.05	56.1
CDY28030	Canola	plastid	54.83	55.85
KRH36465	Soybean	plastid	58.75	55.69
CDY35951	Canola	plastid	54.83	55.41
CDX74036	Canola	plastid	53.79	54.35
CDY07984	Canola	plastid	53.0	53.56
CDY06307	Canola	cytosol	51.17	49.75
CDY30526	Canola	plastid	53.79	49.28
GSMUA_Achr7P00270_001	Banana	cytosol	33.16	48.66
CDX77139	Canola	plastid	53.79	48.36
CDY22691	Canola	cytosol	52.48	48.09
CDX92343	Canola	plastid	52.48	47.29
CDY72678	Canola	plastid	51.44	47.02
CDX88512	Canola	plastid	15.4	46.83
CDY26946	Canola	plastid	51.96	46.82
Zm00001d021611_P001	Maize	cytosol	36.55	46.36
CDY22692	Canola	plastid	50.65	46.3
CDY59281	Canola	plastid	51.17	46.12
CDY19368	Canola	cytosol	86.68	45.86
CDY09152	Canola	plastid	50.65	45.65
CDX77841	Canola	plastid	43.86	43.41
CDY30932	Canola	plastid	43.34	43.01
CDX75178	Canola	cytosol	7.05	39.13
CDX98196	Canola	extracellular	9.14	37.23
Os07t0512000-01	Rice	mitochondrion	24.54	30.32

Protein Annotations

KEGG:00400+4.2.1.51	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	GO:A0A078G7N3	UniProt:A0A078G7N3
InterPro:ACT_dom	EnsemblPlants:CDY21012	ProteinID:CDY21012	ProteinID:CDY21012.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004664	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009073	GO:GO:0009094	GO:GO:0009507
GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0016829	GO:GO:0047769	EnsemblPlantsGene:GSBRNA2T00015170001
InterPro:IPR001086	InterPro:IPR002912	PFAM:PF00800	ScanProsite:PS00857	ScanProsite:PS00858	PFscan:PS51171
PFscan:PS51671	PANTHER:PTHR21022	PANTHER:PTHR21022:SF12	MetaCyc:PWY-7432	InterPro:Preph_deHydtase	InterPro:Preph_deHydtase_CS
SUPFAM:SSF53850	SUPFAM:SSF55021	UniPathway:UPA00121	UniParc:UPI00025463F3	SEG:seg	:

Description

BnaA08g25130DArogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A078G7N3]

Coordinates

chrLK032115:+:316287..319507

Molecular Weight (calculated)

42227.7 Da

IEP (calculated)

7.800

GRAVY (calculated)

-0.123

Length

383 amino acids

Sequence
(BLAST)

001: MALRCFPIWV CPQTPHRYPL VGRRVSLWEC SSSSSGASQR AVTAVEGDGP ELKKKASDEM GLVREAKPVA FHRDLSMLPK PLSASSLYSS AGDDSKVRIS
101: FQGIPGAYSE TAALEAYPNC ETVPCEHFET AFQAVELWLV DKAVLPIENS VGGSIHRNYD LLLRHRLHIV QEVHLPVNHC LLGVPGVTKE EIKRVLSHPQ
201: ALDQCVNSLN DLGIQRISAK DTATAAQTVA SSGKKDVGAI ASVRAANLYG LDILAENIQD DANNVTRFLI LSREPMIPRT DRPYKTSIVF SLEEGPGVLF
301: KALAVFALRS INLSKIESRP QRRRPLRVVD GSNNGSAKSF DYLFYIDFEA SMAEIRAQHA LGHLQEFTSF IRVLGCYPMD LVR

Best Arabidopsis Sequence Match ( AT1G11790.1 )
(BLAST)

001: MALRCFPIWV CPQTTHHRSP LMGLAEFDAD KRRRFCLWEC SSSASQRAVT AIEGEIPFSR ELKKSSDELG LTQETQSLSF HRDLSMLPKP LTANSLYSSD
101: GDDSKVRISF QGIPGAYSET AALKAFPNCE TVPCEQFEAA FQAVELWLVD KAVLPIENSV GGSIHRNYDL LLRHRLHIVQ EVHLPVNHCL LGVPGVKKED
201: IKCVLSHPQA LDQCVNSLNN LGIQRISAKD TATAAQTVSS SGKIDVGAIA SVRAANIYGL DILAENIQDD VNNVTRFLIL AREPMIPRTD RPYKTSIVFS
301: LEEGPGVLFK ALAVFALRSI NLSKIESRPQ RRRPLRVVDG SNNGSAKYFD YLFYIDFEAS MADTRAQHAL GHLQEFASFI RILGCYPMDL VR

Arabidopsis Description

ADT1Arogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A178W336]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.