Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 1
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016813.1-P | Field mustard | mitochondrion | 86.99 | 89.03 |
| CDY21012 | Canola | mitochondrion | 86.99 | 89.03 |
| CDY31213 | Canola | mitochondrion | 86.73 | 89.01 |
| Solyc02g080620.2.1 | Tomato | plastid | 67.35 | 66.0 |
| PGSC0003DMT400042492 | Potato | plastid | 67.09 | 65.75 |
| VIT_10s0116g01670.t01 | Wine grape | plastid | 64.54 | 63.89 |
| GSMUA_Achr8P15920_001 | Banana | cytosol | 50.26 | 60.62 |
| KRH02054 | Soybean | plastid | 61.73 | 60.2 |
| KRH36465 | Soybean | plastid | 58.42 | 56.68 |
| GSMUA_Achr4P23700_001 | Banana | plastid | 58.42 | 55.85 |
| AT3G07630.3 | Thale cress | plastid | 53.83 | 55.38 |
| AT1G08250.1 | Thale cress | plastid | 52.04 | 49.39 |
| GSMUA_Achr7P00270_001 | Banana | cytosol | 32.4 | 48.66 |
| Zm00001d021611_P001 | Maize | cytosol | 37.24 | 48.34 |
| CDY19368 | Canola | cytosol | 87.5 | 47.38 |
| AT2G27820.1 | Thale cress | plastid | 50.0 | 46.23 |
| AT3G44720.1 | Thale cress | plastid | 48.98 | 45.28 |
| AT5G22630.1 | Thale cress | plastid | 48.72 | 44.94 |
| Os07t0512000-01 | Rice | mitochondrion | 25.77 | 32.58 |
Protein Annotations
| KEGG:00400+4.2.1.51 | Gene3D:3.30.70.260 | Gene3D:3.40.190.10 | MapMan:4.1.5.2.4 | EntrezGene:837725 | UniProt:A0A178W336 |
| ProteinID:AAD30242.1 | InterPro:ACT_dom | Symbol:ADT1 | ProteinID:AEE28786.1 | ProteinID:AEE28787.1 | ArrayExpress:AT1G11790 |
| EnsemblPlantsGene:AT1G11790 | RefSeq:AT1G11790 | TAIR:AT1G11790 | RefSeq:AT1G11790-TAIR-G | EnsemblPlants:AT1G11790.1 | TAIR:AT1G11790.1 |
| EMBL:AY042904 | EMBL:AY081528 | Unigene:At.11172 | EMBL:DQ411466 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004664 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008652 | GO:GO:0009058 | GO:GO:0009073 | GO:GO:0009094 | GO:GO:0009507 |
| GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009987 | GO:GO:0016829 | GO:GO:0047769 | InterPro:IPR001086 |
| InterPro:IPR002912 | RefSeq:NP_001031024.1 | RefSeq:NP_172644.1 | ProteinID:OAP11955.1 | PFAM:PF00800 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | ScanProsite:PS00857 | ScanProsite:PS00858 |
| PFscan:PS51171 | PFscan:PS51671 | PANTHER:PTHR21022 | PANTHER:PTHR21022:SF12 | InterPro:Preph_deHydtase | InterPro:Preph_deHydtase_CS |
| UniProt:Q9SA96 | SUPFAM:SSF53850 | SUPFAM:SSF55021 | UniParc:UPI0000048236 | : | : |
Description
ADT1Arogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A178W336]
Coordinates
chr1:+:3981153..3985219
Molecular Weight (calculated)
43607.3 Da
IEP (calculated)
7.271
GRAVY (calculated)
-0.122
Length
392 amino acids
Sequence
(BLAST)
(BLAST)
001: MALRCFPIWV CPQTTHHRSP LMGLAEFDAD KRRRFCLWEC SSSASQRAVT AIEGEIPFSR ELKKSSDELG LTQETQSLSF HRDLSMLPKP LTANSLYSSD
101: GDDSKVRISF QGIPGAYSET AALKAFPNCE TVPCEQFEAA FQAVELWLVD KAVLPIENSV GGSIHRNYDL LLRHRLHIVQ EVHLPVNHCL LGVPGVKKED
201: IKCVLSHPQA LDQCVNSLNN LGIQRISAKD TATAAQTVSS SGKIDVGAIA SVRAANIYGL DILAENIQDD VNNVTRFLIL AREPMIPRTD RPYKTSIVFS
301: LEEGPGVLFK ALAVFALRSI NLSKIESRPQ RRRPLRVVDG SNNGSAKYFD YLFYIDFEAS MADTRAQHAL GHLQEFASFI RILGCYPMDL VR
101: GDDSKVRISF QGIPGAYSET AALKAFPNCE TVPCEQFEAA FQAVELWLVD KAVLPIENSV GGSIHRNYDL LLRHRLHIVQ EVHLPVNHCL LGVPGVKKED
201: IKCVLSHPQA LDQCVNSLNN LGIQRISAKD TATAAQTVSS SGKIDVGAIA SVRAANIYGL DILAENIQDD VNNVTRFLIL AREPMIPRTD RPYKTSIVFS
301: LEEGPGVLFK ALAVFALRSI NLSKIESRPQ RRRPLRVVDG SNNGSAKYFD YLFYIDFEAS MADTRAQHAL GHLQEFASFI RILGCYPMDL VR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.