Factsheet for PGSC0003DMT400042492

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 4
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g080620.2.1	Tomato	plastid	97.75	97.75
VIT_10s0116g01670.t01	Wine grape	plastid	69.5	70.2
CDY31213	Canola	mitochondrion	65.0	68.06
Bra016813.1-P	Field mustard	mitochondrion	64.75	67.62
CDY21012	Canola	mitochondrion	64.75	67.62
AT1G11790.1	Thale cress	plastid	65.75	67.09
GSMUA_Achr8P15920_001	Banana	cytosol	54.0	66.46
KRH02054	Soybean	plastid	65.75	65.42
GSMUA_Achr4P23700_001	Banana	plastid	62.0	60.49
KRH36465	Soybean	plastid	60.5	59.9
PGSC0003DMT400065276	Potato	plastid	53.25	53.79
GSMUA_Achr7P00270_001	Banana	cytosol	34.5	52.87
PGSC0003DMT400018339	Potato	plastid	55.5	51.27
PGSC0003DMT400068261	Potato	plastid	54.25	50.12
Zm00001d021611_P001	Maize	cytosol	37.0	49.01
CDY19368	Canola	cytosol	64.5	35.64
Os07t0512000-01	Rice	mitochondrion	25.5	32.9

Protein Annotations

KEGG:00400+4.2.1.51	EntrezGene:102599157	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	InterPro:ACT_dom
GO:GO:0003674	GO:GO:0003824	GO:GO:0004664	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009073
GO:GO:0009094	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0016829
GO:GO:0047769	InterPro:IPR001086	InterPro:IPR002912	UniProt:M1BD46	PFAM:PF00800	EnsemblPlantsGene:PGSC0003DMG400016478
PGSC:PGSC0003DMG400016478	EnsemblPlants:PGSC0003DMT400042492	ScanProsite:PS00857	ScanProsite:PS00858	PFscan:PS51171	PFscan:PS51671
PANTHER:PTHR21022	PANTHER:PTHR21022:SF12	InterPro:Preph_deHydtase	InterPro:Preph_deHydtase_CS	SUPFAM:SSF53850	SUPFAM:SSF55021
UniParc:UPI000294EC43	RefSeq:XP_006348125.1	:	:	:	:

Description

Arogenate/prephenate dehydratase [Source:PGSC_GENE;Acc:PGSC0003DMG400016478]

Coordinates

chr2:+:36420564..36428494

Molecular Weight (calculated)

44470.4 Da

IEP (calculated)

6.350

GRAVY (calculated)

-0.152

Length

400 amino acids

Sequence
(BLAST)

001: MALKLVPIWA CCTNQQHCCT YPQSLKLGYG CRLSGSTFLN LRDHKKWECL VLLSETERAI TPVEDEQPLA PPGDASVQET QIIQSKGFHR DLQSLPKPLS
101: ATYLSSGQHD DSNVRVAYQG VPGAYSEAAA LKAYPKCEPV PCDQFEAAFK AVELWLVDKA VLPIENSVAG SIHRNYDLLL RHRLHIVGEV QLLVNHCLLG
201: LPGIRKEELK RVVSHPQALE QCNIMLNELG VARLSSDDTS SAAQIVASEG ARDTGAVASA RAAEIYGLSI LAERIQDDPD NITRFLILAR EPIISGTDRP
301: YKTSIVFTLE EGPGVLFKAL AVFALREINL TKIESRPQKK RPLRVVDDSN KGSAKYFDYL FYIDFEASMA DPRAQYALEH LQEFARFIRV LGCYPMDTNL

Best Arabidopsis Sequence Match ( AT1G11790.1 )
(BLAST)

001: MALRCFPIWV CPQTTHHRSP LMGLAEFDAD KRRRFCLWEC SSSASQRAVT AIEGEIPFSR ELKKSSDELG LTQETQSLSF HRDLSMLPKP LTANSLYSSD
101: GDDSKVRISF QGIPGAYSET AALKAFPNCE TVPCEQFEAA FQAVELWLVD KAVLPIENSV GGSIHRNYDL LLRHRLHIVQ EVHLPVNHCL LGVPGVKKED
201: IKCVLSHPQA LDQCVNSLNN LGIQRISAKD TATAAQTVSS SGKIDVGAIA SVRAANIYGL DILAENIQDD VNNVTRFLIL AREPMIPRTD RPYKTSIVFS
301: LEEGPGVLFK ALAVFALRSI NLSKIESRPQ RRRPLRVVDG SNNGSAKYFD YLFYIDFEAS MADTRAQHAL GHLQEFASFI RILGCYPMDL VR

Arabidopsis Description

ADT1Arogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A178W336]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.