CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 2
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G11790.1	Thale cress	plastid	47.38	87.5
CDY21012	Canola	mitochondrion	45.86	86.68
CDY31213	Canola	mitochondrion	45.72	86.65
Solyc02g080620.2.1	Tomato	plastid	35.64	64.5
PGSC0003DMT400042492	Potato	plastid	35.64	64.5
VIT_10s0116g01670.t01	Wine grape	plastid	33.7	61.62
GSMUA_Achr8P15920_001	Banana	cytosol	26.52	59.08
KRH02054	Soybean	plastid	32.6	58.71
KRH36465	Soybean	plastid	31.22	55.94
GSMUA_Achr4P23700_001	Banana	plastid	30.94	54.63
CDY28030	Canola	plastid	28.18	54.26
CDY35951	Canola	plastid	28.18	53.83
CDX74036	Canola	plastid	27.76	53.03
CDY07984	Canola	plastid	27.35	52.24
CDY06307	Canola	cytosol	27.49	50.51
CDY22691	Canola	cytosol	28.87	50.0
CDX88512	Canola	plastid	8.7	50.0
CDY30526	Canola	plastid	28.59	49.52
CDX77139	Canola	plastid	28.45	48.36
CDY72678	Canola	plastid	27.76	47.97
GSMUA_Achr7P00270_001	Banana	cytosol	17.27	47.89
CDY26946	Canola	plastid	27.9	47.53
CDX92343	Canola	plastid	27.9	47.53
CDY22692	Canola	plastid	27.49	47.49
CDY59281	Canola	plastid	27.49	46.82
CDY09152	Canola	plastid	27.49	46.82
Zm00001d021611_P001	Maize	cytosol	19.48	46.69
CDX77841	Canola	plastid	24.17	45.22
CDY30932	Canola	plastid	23.48	44.04
CDX75178	Canola	cytosol	4.01	42.03
CDX98196	Canola	extracellular	5.11	39.36
Os07t0512000-01	Rice	mitochondrion	13.26	30.97

Protein Annotations

KEGG:00400+4.2.1.51	KEGG:00620+4.4.1.5	MapMan:2.1.2.1	Gene3D:3.10.180.10	Gene3D:3.30.70.260	Gene3D:3.40.190.10
MapMan:4.1.5.2.4	GO:A0A078G3T3	UniProt:A0A078G3T3	InterPro:ACT_dom	EnsemblPlants:CDY19368	ProteinID:CDY19368
ProteinID:CDY19368.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004462	GO:GO:0004664	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152
GO:GO:0008652	GO:GO:0009058	GO:GO:0009073	GO:GO:0009094	GO:GO:0009507	GO:GO:0009536
GO:GO:0009570	GO:GO:0009987	GO:GO:0016829	GO:GO:0046872	GO:GO:0047769	EnsemblPlantsGene:GSBRNA2T00008904001
InterPro:Glyas_Bleomycin-R_OHBP_Dase	InterPro:Glyas_Fos-R_dOase_dom	InterPro:Glyoxalase_1	InterPro:Glyoxalase_1_CS	InterPro:IPR001086	InterPro:IPR002912
InterPro:IPR029068	InterPro:IPR037523	PFAM:PF00800	PFAM:PF00903	ScanProsite:PS00857	ScanProsite:PS00858
ScanProsite:PS00934	PFscan:PS51171	PFscan:PS51671	PFscan:PS51819	PANTHER:PTHR21022	PANTHER:PTHR21022:SF12
MetaCyc:PWY-5386	MetaCyc:PWY-7432	InterPro:Preph_deHydtase	InterPro:Preph_deHydtase_CS	SUPFAM:SSF53850	SUPFAM:SSF54593
SUPFAM:SSF55021	TIGRFAMs:TIGR00068	UniPathway:UPA00121	UniPathway:UPA00619	UniParc:UPI0004EF2A78	InterPro:VOC
SEG:seg	:	:	:	:	:

Description

BnaC05g08770DArogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A078G3T3]

Coordinates

chrLK032095:+:344343..349706

Molecular Weight (calculated)

80677.0 Da

IEP (calculated)

7.597

GRAVY (calculated)

-0.214

Length

724 amino acids

Sequence
(BLAST)

001: MALRCFPIWV CPQTAYYHYP LLGFDTKRRR ICLWECSSSA SQRAITAVGG DVPYGRELKK PSDEMGLTQE RPQLETFHRD LSMLPKPLTA NSLTSSAWDD
101: SKVRISFQGI PGAYSETAAL KAYPNCETVP CDQFETAFQA VELWLVDKAV LPIENSVGGS IHRNYDLLLR HRLHIAQEVH LPVNHCLLGV PGVQKEDIKC
201: VLSHPQALDQ CVNSLNELGI QRVSAKDTAT AAQTVSSSGE RSIGAVASVR AANIYGLDIL AQNIQDDANN VTRFLILARD PMIPRTDRPY KTSIVFSLEE
301: GPGVLFKALA VFALRNINLS KIESRPQRGR PLRVVDGSNN GCAKYFDYLF YIDFEASMAE TCAQHALGHL QEFTSFIRIL GCYPMDLDSS LTILSSSKLS
401: FKLFIAETNS SSREVVGQLE SDCFSSDGRS KSSGICSPRA SYLRKLADVA SNGELLDWPK NDTRRFFHVV YRVGDLDRTI KFYTECFGMK VSRQRDVPKE
501: KYSNAFMGFG SEKSHFAIMV LAHMKLKMDL GISPFQLKMQ VYKMVETVRA KGGNVTREPG PVEGGSSIIA IVKDPDGYPF ELIQRGPTPE PFCQVMLRVG
601: DLDGAIKFYE KALGMRLLRR IEKPEYKYTI GMMGYNESVV LELAYNYGVT EYKKGNAYAQ IAIGTDDVYK SGEVVKIVNK ELGGDITREP GPLPGIDTKI
701: VSFLDPDGWK TVLVDNKDFM KELG

Best Arabidopsis Sequence Match ( AT1G11790.1 )
(BLAST)

001: MALRCFPIWV CPQTTHHRSP LMGLAEFDAD KRRRFCLWEC SSSASQRAVT AIEGEIPFSR ELKKSSDELG LTQETQSLSF HRDLSMLPKP LTANSLYSSD
101: GDDSKVRISF QGIPGAYSET AALKAFPNCE TVPCEQFEAA FQAVELWLVD KAVLPIENSV GGSIHRNYDL LLRHRLHIVQ EVHLPVNHCL LGVPGVKKED
201: IKCVLSHPQA LDQCVNSLNN LGIQRISAKD TATAAQTVSS SGKIDVGAIA SVRAANIYGL DILAENIQDD VNNVTRFLIL AREPMIPRTD RPYKTSIVFS
301: LEEGPGVLFK ALAVFALRSI NLSKIESRPQ RRRPLRVVDG SNNGSAKYFD YLFYIDFEAS MADTRAQHAL GHLQEFASFI RILGCYPMDL VR

Arabidopsis Description

ADT1Arogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A178W336]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.