Factsheet for GSMUA_Achr8P15920_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	64.0	59.77
GSMUA_Achr4P23700_001	Banana	plastid	75.08	59.51
GSMUA_Achr6P15520_001	Banana	cytosol	62.15	59.41
KRH22575	Soybean	cytosol	45.54	57.59
GSMUA_Achr8P07590_001	Banana	cytosol	49.54	56.49
GSMUA_Achr7P00270_001	Banana	cytosol	44.62	55.56
VIT_12s0059g00750.t01	Wine grape	plastid	66.46	54.68
Solyc02g080620.2.1	Tomato	plastid	66.77	54.25
VIT_10s0116g01670.t01	Wine grape	plastid	65.85	54.04
PGSC0003DMT400042492	Potato	plastid	66.46	54.0
KRH26772	Soybean	plastid	61.54	52.08
Bra016813.1-P	Field mustard	mitochondrion	60.92	51.7
CDY21012	Canola	mitochondrion	60.92	51.7
CDY31213	Canola	mitochondrion	60.62	51.57
AT1G11790.1	Thale cress	plastid	60.62	50.26
GSMUA_Achr10P...	Banana	plastid	32.0	50.0
Zm00001d021611_P001	Maize	cytosol	45.23	48.68
KRH02054	Soybean	plastid	58.15	47.01
KRH36465	Soybean	plastid	57.23	46.04
GSMUA_Achr3P22810_001	Banana	plastid	52.0	43.22
GSMUA_AchrUn_...	Banana	plastid	52.31	42.71
GSMUA_Achr8P33080_001	Banana	plastid	56.92	42.43
Os07t0512000-01	Rice	mitochondrion	32.31	33.87
GSMUA_Achr1P03870_001	Banana	plastid	36.0	33.33
GSMUA_Achr3P18150_001	Banana	plastid	34.46	31.02
GSMUA_Achr8P18790_001	Banana	plastid	38.46	30.56
GSMUA_Achr3P24700_001	Banana	plastid	33.54	28.91
GSMUA_Achr5P18480_001	Banana	plastid	36.0	28.82
GSMUA_Achr6P17230_001	Banana	plastid	25.23	28.08
CDY19368	Canola	cytosol	59.08	26.52

Protein Annotations

KEGG:00400+4.2.1.51	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	InterPro:ACT_dom	InterPro:Chor_mutase/pphenate_deHydtase
GO:GO:0003674	GO:GO:0003824	GO:GO:0004106	GO:GO:0004664	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058
GO:GO:0009073	GO:GO:0009094	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987
GO:GO:0016829	GO:GO:0047769	EnsemblPlantsGene:GSMUA_Achr8G15920_001	EnsemblPlants:GSMUA_Achr8P15920_001	EnsemblPlants:GSMUA_Achr8T15920_001	InterPro:IPR001086
InterPro:IPR002912	UniProt:M0TQU5	PFAM:PF00800	PIRSF:PIRSF001500	ScanProsite:PS00857	ScanProsite:PS00858
PFscan:PS51171	PFscan:PS51671	PANTHER:PTHR21022	PANTHER:PTHR21022:SF12	InterPro:Preph_deHydtase	InterPro:Preph_deHydtase_CS
SUPFAM:SSF53850	SUPFAM:SSF55021	UniParc:UPI0002948FA6	:	:	:

Description

Arogenate dehydratase/prephenate dehydratase 6, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr8G15920_001]

Coordinates

chr8:+:13725067..13732272

Molecular Weight (calculated)

35828.6 Da

IEP (calculated)

8.075

GRAVY (calculated)

0.073

Length

325 amino acids

Sequence
(BLAST)

001: MHAKGEVNRC GIPLYWMKLV AGKPLSSTDL SVSGHKPNIR VAYQGCPGAF GEAAARKVYP DCQAVPCEQF EVAFKAVQLW LADKAVLPIE NSSFGSYHRT
101: HDLLLSHSLH IVGEVQLAVD HCLMALPGVK KKELKRVLSH PQALGQCEIA LSKLGVIRES FDDTAGAARL IASKGLGDVG AIASAQAAEI YGLHILEDKI
201: QDISFNITRF LILAREPIIP RIGCPFKTSI VFTLEDGSGV LYKALAVFAL RNINLTKIES RPQRKRPLRF VDDTDHGTAK YFDYLFYIDF EASMAEPRAQ
301: NALSNLQEFV TFLRVLGSFP MDITL

Best Arabidopsis Sequence Match ( AT1G08250.1 )
(BLAST)

001: MKALSSSSPI LGASQPATAT ALIARSGRSE WQSSCAILTS KVISQEESES LPVPPVSGGV DHLNGHNSAA ARVPGMNLVP IEKSDSNPLV PQHRHNPLKP
101: LSMTDLSPAP MHGSNLRVAY QGVPGAYSEA AAGKAYPNCQ AIPCDQFEVA FQAVELWIAD RAVLPVENSL GGSIHRNYDL LLRHRLHIVG EVQLPVHHCL
201: LALPGVRKEF LTRVISHPQG LAQCEHTLTK LGLNVAREAV DDTAGAAEFI ASNNLRDTAA IASARAAEIY GLEILEDGIQ DDVSNVTRFV MLAREPIIPR
301: TDRPFKTSIV FAHEKGTSVL FKVLSAFAFR DISLTKIESR PNHNRPIRVV DDANVGTAKH FEYMFYVDFE ASMAEARAQN ALAEVQEFTS FLRVLGSYPM
401: DMTPWSPTSS TSS

Arabidopsis Description

ADT6Arogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A178W954]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.