Factsheet for GSMUA_Achr5P18480_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P18790_001	Banana	plastid	74.14	73.59
GSMUA_Achr3P24700_001	Banana	plastid	55.17	59.42
GSMUA_Achr8P07590_001	Banana	cytosol	27.09	38.6
GSMUA_Achr6P15520_001	Banana	cytosol	31.53	37.65
GSMUA_Achr8P15920_001	Banana	cytosol	28.82	36.0
GSMUA_Achr10P...	Banana	cytosol	30.3	35.34
GSMUA_Achr10P...	Banana	plastid	17.73	34.62
GSMUA_Achr7P00270_001	Banana	cytosol	21.43	33.33
GSMUA_Achr4P23700_001	Banana	plastid	33.25	32.93
GSMUA_AchrUn_...	Banana	plastid	30.3	30.9
GSMUA_Achr3P22810_001	Banana	plastid	29.31	30.43
GSMUA_Achr8P33080_001	Banana	plastid	30.54	28.44
GSMUA_Achr3P18150_001	Banana	plastid	23.89	26.87
GSMUA_Achr1P03870_001	Banana	plastid	22.91	26.5
GSMUA_Achr6P17230_001	Banana	plastid	18.72	26.03

Protein Annotations

KEGG:00400+4.2.1.51	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	GO:GO:0003674	GO:GO:0003824
GO:GO:0004664	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009094	GO:GO:0009987
EnsemblPlantsGene:GSMUA_Achr5G18480_001	EnsemblPlants:GSMUA_Achr5P18480_001	EnsemblPlants:GSMUA_Achr5T18480_001	InterPro:IPR001086	UniProt:M0SZM7	PFAM:PF00800
PFscan:PS51171	PANTHER:PTHR21022	InterPro:Preph_deHydtase	SUPFAM:SSF53850	SUPFAM:SSF55021	UniParc:UPI0002951BC2
SEG:seg	:	:	:	:	:

Description

Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G18480_001]

Coordinates

chr5:+:19963051..19964271

Molecular Weight (calculated)

43808.8 Da

IEP (calculated)

7.128

GRAVY (calculated)

-0.250

Length

406 amino acids

Sequence
(BLAST)

001: MALRLPPPAA SAANITSKNR GRFAGRIDIR AAANQKVEHD RSREVYTSRP RKSPSPLGTA EEMASRLGHD IAVANLERLF RQQTAGGDRP PADGGSSGRP
101: VRVAYQGSRG SYCQEAAARA FPSSACEAFP CAHMEDAFAV LEDHSADRAV VPAENSLDGP IDRNLDLLLR HPGVRILGEL VLPVNHCLLS LPGAPRSGLR
201: RVISHPQALS HCRRSLEALD LEVDEVCSAA EAAQFVAENR VADTAVIGSK MAAREFGLWV LEPDFQDQHL GGNFNRFLQL GLPSHAQGLS SSSSTSGRRS
301: EQKTTVAFTL EDGASDLFRA MWIFESRGVK VLRVDHRPNR TKPLRVVERG GDGLETATYL DYVFVLDLVG SASDPAVEAA LAQMTEIAGF VRVLGSYVST
401: CHPGIN

Best Arabidopsis Sequence Match ( AT1G08250.1 )
(BLAST)

001: MKALSSSSPI LGASQPATAT ALIARSGRSE WQSSCAILTS KVISQEESES LPVPPVSGGV DHLNGHNSAA ARVPGMNLVP IEKSDSNPLV PQHRHNPLKP
101: LSMTDLSPAP MHGSNLRVAY QGVPGAYSEA AAGKAYPNCQ AIPCDQFEVA FQAVELWIAD RAVLPVENSL GGSIHRNYDL LLRHRLHIVG EVQLPVHHCL
201: LALPGVRKEF LTRVISHPQG LAQCEHTLTK LGLNVAREAV DDTAGAAEFI ASNNLRDTAA IASARAAEIY GLEILEDGIQ DDVSNVTRFV MLAREPIIPR
301: TDRPFKTSIV FAHEKGTSVL FKVLSAFAFR DISLTKIESR PNHNRPIRVV DDANVGTAKH FEYMFYVDFE ASMAEARAQN ALAEVQEFTS FLRVLGSYPM
401: DMTPWSPTSS TSS

Arabidopsis Description

ADT6Arogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A178W954]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.