Factsheet for GSMUA_AchrUn_randomP19740_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 7

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr3P22810_001
GSMUA_Achr4P04340_001
GSMUA_Achr4P20870_001
GSMUA_Achr4P22090_001
GSMUA_Achr5P14740_001
GSMUA_Achr7P01890_001
GSMUA_Achr8P07590_001
GSMUA_Achr8P33080_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G44720.1	GSMUA_Achr10P...	AT3G44720.1	21798944
AT3G44720.1	GSMUA_Achr3P22810_001	AT3G44720.1	21798944
AT3G44720.1	GSMUA_Achr8P07590_001	AT3G44720.1	21798944
AT3G44720.1	GSMUA_Achr8P33080_001	AT3G44720.1	21798944
AT3G44720.1	GSMUA_AchrUn_...	AT3G44720.1	21798944
AT3G44720.1	GSMUA_Achr4P04340_001	AT3G54826.1	21798944
AT3G44720.1	GSMUA_Achr4P20870_001	AT5G65683.1	21798944
AT3G44720.1	GSMUA_Achr4P22090_001	AT5G65683.1	21798944
AT3G44720.1	GSMUA_Achr5P14740_001	AT5G65683.1	21798944
AT3G44720.1	GSMUA_Achr7P01890_001	AT5G65683.1	21798944
AT5G22630.1	GSMUA_Achr10P...	AT3G44720.1	21798944
AT5G22630.1	GSMUA_Achr3P22810_001	AT3G44720.1	21798944
AT5G22630.1	GSMUA_Achr8P07590_001	AT3G44720.1	21798944
AT5G22630.1	GSMUA_Achr8P33080_001	AT3G44720.1	21798944
AT5G22630.1	GSMUA_AchrUn_...	AT3G44720.1	21798944
AT5G22630.1	GSMUA_Achr10P...	AT5G22630.1	21798944
AT5G22630.1	GSMUA_Achr3P22810_001	AT5G22630.1	21798944
AT5G22630.1	GSMUA_Achr8P07590_001	AT5G22630.1	21798944
AT5G22630.1	GSMUA_Achr8P33080_001	AT5G22630.1	21798944
AT5G22630.1	GSMUA_AchrUn_...	AT5G22630.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P07590_001	Banana	cytosol	60.55	84.56
GSMUA_Achr8P33080_001	Banana	plastid	79.65	72.71
GSMUA_Achr3P22810_001	Banana	plastid	66.33	67.52
VIT_06s0061g01300.t01	Wine grape	mitochondrion, plastid	68.59	66.42
KRH26581	Soybean	plastid	68.09	63.76
KRH22725	Soybean	plastid	67.84	63.68
Solyc06g074530.1.1	Tomato	plastid	67.34	61.89
PGSC0003DMT400018339	Potato	plastid	67.34	61.89
AT1G08250.1	Thale cress	plastid	64.07	61.74
KRH25168	Soybean	plastid	65.83	61.22
CDY06307	Canola	cytosol	60.55	61.17
Solyc11g066890.1.1	Tomato	plastid	65.58	61.12
Bra034372.1-P	Field mustard	plastid	64.07	61.0
CDY30526	Canola	plastid	64.07	61.0
PGSC0003DMT400068261	Potato	plastid	66.08	60.74
CDY26946	Canola	plastid	64.82	60.71
Bra031620.1-P	Field mustard	cytosol	60.05	60.66
KRH30513	Soybean	plastid	65.08	60.51
CDX92343	Canola	plastid	64.57	60.47
AT5G22630.1	Thale cress	plastid	64.57	60.47
AT2G27820.1	Thale cress	plastid	63.82	59.91
AT3G44720.1	Thale cress	plastid	63.82	59.91
CDX77139	Canola	plastid	64.07	59.86
CDY59281	Canola	plastid	63.82	59.76
CDY09152	Canola	plastid	63.82	59.76
Bra002423.1-P	Field mustard	plastid	64.57	59.49
Bra019468.1-P	Field mustard	plastid	57.04	58.81
Bra020203.1-P	Field mustard	plastid	63.82	58.8
CDX77841	Canola	plastid	57.04	58.66
CDY30932	Canola	plastid	56.78	58.55
CDY22691	Canola	cytosol	60.8	57.89
GSMUA_Achr10P...	Banana	plastid	30.15	57.69
CDY72678	Canola	plastid	58.79	55.85
Bra031619.1-P	Field mustard	plastid	58.79	55.85
CDY22692	Canola	plastid	58.04	55.13
GSMUA_Achr8P15920_001	Banana	cytosol	42.71	52.31
GSMUA_Achr10P...	Banana	cytosol	43.47	49.71
GSMUA_Achr6P15520_001	Banana	cytosol	40.95	47.94
GSMUA_Achr6P17230_001	Banana	plastid	32.66	44.52
GSMUA_Achr4P23700_001	Banana	plastid	45.73	44.39
GSMUA_Achr7P00270_001	Banana	cytosol	26.63	40.61
GSMUA_Achr1P03870_001	Banana	plastid	32.66	37.04
GSMUA_Achr3P18150_001	Banana	plastid	31.41	34.63
GSMUA_Achr3P24700_001	Banana	plastid	31.66	33.42
GSMUA_Achr8P18790_001	Banana	plastid	32.66	31.78
GSMUA_Achr5P18480_001	Banana	plastid	30.9	30.3

Protein Annotations

KEGG:00400+4.2.1.51	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	InterPro:ACT_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0004664	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009094
GO:GO:0009987	EnsemblPlantsGene:GSMUA_AchrUn_randomG19740_001	EnsemblPlants:GSMUA_AchrUn_randomP19740_001	EnsemblPlants:GSMUA_AchrUn_randomT19740_001	InterPro:IPR001086	InterPro:IPR002912
UniProt:M0UAN3	PFAM:PF00800	ScanProsite:PS00858	PFscan:PS51171	PFscan:PS51671	PANTHER:PTHR21022
PANTHER:PTHR21022:SF13	InterPro:Preph_deHydtase	InterPro:Preph_deHydtase_CS	SUPFAM:SSF53850	SUPFAM:SSF55021	UniParc:UPI0002954E6B
SEG:seg	:	:	:	:	:

Description

Arogenate dehydratase 4, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG19740_001]

Coordinates

chrchrUn_random:-:95453822..95455240

Molecular Weight (calculated)

43009.1 Da

IEP (calculated)

7.719

GRAVY (calculated)

-0.158

Length

398 amino acids

Sequence
(BLAST)

001: MYMSTMAAVM LSSAPRHVLS PIFPPPDNHV PPPTALPKRG PAFRRLPSAV LRSAIRSIYV PESTSAAPFP GALGSSRSDW QTNCAILASK AASSNDGNHY
101: HLTSPTPVNG LKQNSATLDL VPVANLPRPL SISDLSPSPK HGSSVRVAYQ GVPGAYSEAA AGKAYPNCEA IPCDQFEVAF QAVELWIADR AVLPVENSLG
201: GSIHRNYDLL LRHRLHIVGE VQLPVHHCLL ALPGVRKEQL TRAFDDTAGA AEYVANNGLR DTAAIASARA AELYKLQVLA DGIQDDSGNV TRFGTSVLFK
301: VLSAFAFRDI SLTKIESRPH RHRPLRLVDD ANVGTAKHFE YMFYVDFEAS MAETRAQKAL AEVQEYTSFL RVLGSYPMDM TPWDASSSPS PPTPPSSS

Best Arabidopsis Sequence Match ( AT5G22630.1 )
(BLAST)

001: MQTISPAFSC DLKSVIQPNL TAKKARYSHV NGKRVSVRCS YRSESFSFPN GVGSSRADWQ SSCAILASKV VSAENSSSVA VVNGHSNGSV DLSLVPSKSQ
101: HNGKPGLIQP LTITDLSPAP SHGSTLRVAY QGVPGAYSEA AAGKAYPNSE AIPCDQFDVA FQAVELWIAD RAVLPVENSL GGSIHRNYDL LLRHRLHIVG
201: EVQIPVHHCL LALPGVRTDC ITRVISHPQA LAQTEGSLNK LTPKAAIEAF HDTAAAAEYI AANNLHDTAA VASARAAELY GLQILADGIQ DDAGNVTRFL
301: MLARDPIIPR TDRPFKTSIV FAAQEHKGTS VLFKVLSAFA FRNISLTKIE SRPHQNCPVR VVGDENVGTS KHFEYTFYVD FEASMAEARA QNALAEVQEY
401: TSFLRVLGSY PMDMTPWSTL PSEDV

Arabidopsis Description

ADT5Arogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A178UL55]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.