Factsheet for GSMUA_Achr6P17230_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88512	Canola	plastid	28.08	65.08
GSMUA_Achr3P22810_001	Banana	plastid	44.52	33.25
GSMUA_AchrUn_...	Banana	plastid	44.52	32.66
GSMUA_Achr8P07590_001	Banana	cytosol	30.48	31.23
GSMUA_Achr8P33080_001	Banana	plastid	43.84	29.36
GSMUA_Achr7P00270_001	Banana	cytosol	24.66	27.59
GSMUA_Achr10P...	Banana	cytosol	32.19	27.01
GSMUA_Achr6P15520_001	Banana	cytosol	30.48	26.18
GSMUA_Achr8P15920_001	Banana	cytosol	28.08	25.23
GSMUA_Achr4P23700_001	Banana	plastid	33.22	23.66
GSMUA_Achr8P18790_001	Banana	plastid	28.77	20.54
GSMUA_Achr3P24700_001	Banana	plastid	24.32	18.83
GSMUA_Achr5P18480_001	Banana	plastid	26.03	18.72
GSMUA_Achr1P03870_001	Banana	plastid	21.58	17.95
GSMUA_Achr3P18150_001	Banana	plastid	21.92	17.73
GSMUA_Achr10P...	Banana	plastid	8.22	11.54
KRG93965	Soybean	cytosol	2.4	8.54

Protein Annotations

KEGG:00400+4.2.1.51	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	GO:GO:0003674	GO:GO:0003824	GO:GO:0004664
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009094	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr6G17230_001
EnsemblPlants:GSMUA_Achr6P17230_001	EnsemblPlants:GSMUA_Achr6T17230_001	InterPro:IPR001086	UniProt:M0T7S1	PFAM:PF00800	PFscan:PS51171
PANTHER:PTHR21022	PANTHER:PTHR21022:SF14	InterPro:Preph_deHydtase	SUPFAM:SSF53850	UniParc:UPI00029537C1	SEG:seg

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G17230_001]

Coordinates

chr6:+:11589820..11591547

Molecular Weight (calculated)

30718.3 Da

IEP (calculated)

10.148

GRAVY (calculated)

-0.407

Length

292 amino acids

Sequence
(BLAST)

001: MAAILTPATT GPHSTRLALP IAKPKIPLQR THLVRCVHRP EISPFFHGAV GANRADWQSA CAILSSKVAT TSQNHQQTPQ HHEAGDDTNH SLVPVVNGHG
101: SAAAALDLVP VQLPQPLTIA DLSPAPKHGS QLRVAYQGVP GAYSEAAAAK AYPNCDAIPC DQFEAAFQAV ELWVADRAVL PVENSLGGSI HRNYDLLLRH
201: RLHIVGEPPA SPLPVRAHPD GDGPQCGARS LRRHGRGRRV RGVERATGHG GHRVGSGSGA VRDAGAGGRD PGRQRQRDAV RDAGAGAHRA PG

Best Arabidopsis Sequence Match ( AT1G08250.1 )
(BLAST)

001: MKALSSSSPI LGASQPATAT ALIARSGRSE WQSSCAILTS KVISQEESES LPVPPVSGGV DHLNGHNSAA ARVPGMNLVP IEKSDSNPLV PQHRHNPLKP
101: LSMTDLSPAP MHGSNLRVAY QGVPGAYSEA AAGKAYPNCQ AIPCDQFEVA FQAVELWIAD RAVLPVENSL GGSIHRNYDL LLRHRLHIVG EVQLPVHHCL
201: LALPGVRKEF LTRVISHPQG LAQCEHTLTK LGLNVAREAV DDTAGAAEFI ASNNLRDTAA IASARAAEIY GLEILEDGIQ DDVSNVTRFV MLAREPIIPR
301: TDRPFKTSIV FAHEKGTSVL FKVLSAFAFR DISLTKIESR PNHNRPIRVV DDANVGTAKH FEYMFYVDFE ASMAEARAQN ALAEVQEFTS FLRVLGSYPM
401: DMTPWSPTSS TSS

Arabidopsis Description

ADT6Arogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A178W954]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.