Factsheet for GSMUA_Achr8P33080_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr3P22810_001
GSMUA_Achr4P04340_001
GSMUA_Achr4P20870_001
GSMUA_Achr4P22090_001
GSMUA_Achr5P14740_001
GSMUA_Achr7P01890_001
GSMUA_Achr8P07590_001
GSMUA_Achr8P33080_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G44720.1	GSMUA_Achr10P...	AT3G44720.1	21798944
AT3G44720.1	GSMUA_Achr3P22810_001	AT3G44720.1	21798944
AT3G44720.1	GSMUA_Achr8P07590_001	AT3G44720.1	21798944
AT3G44720.1	GSMUA_Achr8P33080_001	AT3G44720.1	21798944
AT3G44720.1	GSMUA_AchrUn_...	AT3G44720.1	21798944
AT3G44720.1	GSMUA_Achr4P04340_001	AT3G54826.1	21798944
AT3G44720.1	GSMUA_Achr4P20870_001	AT5G65683.1	21798944
AT3G44720.1	GSMUA_Achr4P22090_001	AT5G65683.1	21798944
AT3G44720.1	GSMUA_Achr5P14740_001	AT5G65683.1	21798944
AT3G44720.1	GSMUA_Achr7P01890_001	AT5G65683.1	21798944
AT5G22630.1	GSMUA_Achr10P...	AT3G44720.1	21798944
AT5G22630.1	GSMUA_Achr3P22810_001	AT3G44720.1	21798944
AT5G22630.1	GSMUA_Achr8P07590_001	AT3G44720.1	21798944
AT5G22630.1	GSMUA_Achr8P33080_001	AT3G44720.1	21798944
AT5G22630.1	GSMUA_AchrUn_...	AT3G44720.1	21798944
AT5G22630.1	GSMUA_Achr10P...	AT5G22630.1	21798944
AT5G22630.1	GSMUA_Achr3P22810_001	AT5G22630.1	21798944
AT5G22630.1	GSMUA_Achr8P07590_001	AT5G22630.1	21798944
AT5G22630.1	GSMUA_Achr8P33080_001	AT5G22630.1	21798944
AT5G22630.1	GSMUA_AchrUn_...	AT5G22630.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P07590_001	Banana	cytosol	53.9	82.46
GSMUA_AchrUn_...	Banana	plastid	72.71	79.65
VIT_06s0061g01300.t01	Wine grape	mitochondrion, plastid	66.74	70.8
KRH26581	Soybean	plastid	66.28	68.0
KRH22725	Soybean	plastid	65.83	67.69
Bra034372.1-P	Field mustard	plastid	63.76	66.51
CDY30526	Canola	plastid	63.76	66.51
GSMUA_Achr3P22810_001	Banana	plastid	59.4	66.24
AT1G08250.1	Thale cress	plastid	62.61	66.1
Solyc06g074530.1.1	Tomato	plastid	65.6	66.05
PGSC0003DMT400018339	Potato	plastid	65.6	66.05
CDY06307	Canola	cytosol	59.63	65.99
AT2G27820.1	Thale cress	plastid	63.99	65.8
KRH25168	Soybean	plastid	64.45	65.65
Bra031620.1-P	Field mustard	cytosol	59.17	65.48
Solyc11g066890.1.1	Tomato	plastid	63.99	65.34
CDX77139	Canola	plastid	63.76	65.26
KRH30513	Soybean	plastid	63.99	65.19
AT5G22630.1	Thale cress	plastid	63.53	65.18
CDY26946	Canola	plastid	63.3	64.94
PGSC0003DMT400068261	Potato	plastid	64.45	64.9
CDX92343	Canola	plastid	62.84	64.47
CDY09152	Canola	plastid	62.61	64.24
CDY59281	Canola	plastid	62.61	64.24
AT3G44720.1	Thale cress	plastid	61.7	63.44
Bra002423.1-P	Field mustard	plastid	62.84	63.43
Bra020203.1-P	Field mustard	plastid	62.61	63.19
CDY22691	Canola	cytosol	60.09	62.68
Bra019468.1-P	Field mustard	plastid	54.13	61.14
Bra031619.1-P	Field mustard	plastid	58.49	60.86
CDY22692	Canola	plastid	58.26	60.62
CDY72678	Canola	plastid	58.03	60.38
CDY30932	Canola	plastid	53.44	60.36
CDX77841	Canola	plastid	53.44	60.21
GSMUA_Achr8P15920_001	Banana	cytosol	42.43	56.92
GSMUA_Achr10P...	Banana	plastid	27.06	56.73
GSMUA_Achr10P...	Banana	cytosol	43.58	54.6
GSMUA_Achr6P15520_001	Banana	cytosol	41.74	53.53
GSMUA_Achr4P23700_001	Banana	plastid	46.1	49.02
GSMUA_Achr7P00270_001	Banana	cytosol	27.29	45.59
GSMUA_Achr6P17230_001	Banana	plastid	29.36	43.84
GSMUA_Achr1P03870_001	Banana	plastid	31.88	39.6
GSMUA_Achr3P18150_001	Banana	plastid	31.19	37.67
GSMUA_Achr3P24700_001	Banana	plastid	29.36	33.95
GSMUA_Achr8P18790_001	Banana	plastid	30.28	32.27
GSMUA_Achr5P18480_001	Banana	plastid	28.44	30.54

Protein Annotations

KEGG:00400+4.2.1.51	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	InterPro:ACT_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0004664	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009073	GO:GO:0009094
GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0016829	GO:GO:0047769
EnsemblPlantsGene:GSMUA_Achr8G33080_001	EnsemblPlants:GSMUA_Achr8P33080_001	EnsemblPlants:GSMUA_Achr8T33080_001	InterPro:IPR001086	InterPro:IPR002912	UniProt:M0TVR0
PFAM:PF00800	ScanProsite:PS00857	ScanProsite:PS00858	PFscan:PS51171	PFscan:PS51671	PANTHER:PTHR21022
PANTHER:PTHR21022:SF13	InterPro:Preph_deHydtase	InterPro:Preph_deHydtase_CS	SUPFAM:SSF53850	SUPFAM:SSF55021	UniParc:UPI000295BEA1
SEG:seg	:	:	:	:	:

Description

Arogenate dehydratase/prephenate dehydratase 6, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr8G33080_001]

Coordinates

chr8:-:34223899..34226555

Molecular Weight (calculated)

47541.9 Da

IEP (calculated)

7.448

GRAVY (calculated)

-0.243

Length

436 amino acids

Sequence
(BLAST)

001: MRVFFFHISP PNSCYLYKNS SQIQQNAPPT AIPKHRPAIR RVFSTALRPT VRSIYLPDSS SASPFHDAVG RSDWQTNFAI LASKASSYSS SPSSSGKDGA
101: ASSESTNGND GNQYHLVSPP PVNGPNQSSA TLDLVPVTNL PRPLSIAYLS PAPKHGSRLR VAYQGVPGAY SEAAAGKAYP NCEAIPCDQF EVAFQAVELW
201: IADSAVLPVE NSLGGSIHRN YDLLLRHRLH IVGEVQLPVH HCLLALPGVR KEQLTRAFDD TAGAAEYVAN NGLRDTAAIA SARAAELYGM QVLADGIQDD
301: SGNVTRFVML ARDPIIPRTD RPFKTSIVFA HDREGTSVLF KVLSAFAFRD INLTKIESRP HRHQPLRLVD DANVGTAKHF EYMFYIDFEA SMAETRAQNA
401: LAEVQEYTSF LRVLGSYPMD MTPWAASSTT NSSASS

Best Arabidopsis Sequence Match ( AT1G08250.1 )
(BLAST)

001: MKALSSSSPI LGASQPATAT ALIARSGRSE WQSSCAILTS KVISQEESES LPVPPVSGGV DHLNGHNSAA ARVPGMNLVP IEKSDSNPLV PQHRHNPLKP
101: LSMTDLSPAP MHGSNLRVAY QGVPGAYSEA AAGKAYPNCQ AIPCDQFEVA FQAVELWIAD RAVLPVENSL GGSIHRNYDL LLRHRLHIVG EVQLPVHHCL
201: LALPGVRKEF LTRVISHPQG LAQCEHTLTK LGLNVAREAV DDTAGAAEFI ASNNLRDTAA IASARAAEIY GLEILEDGIQ DDVSNVTRFV MLAREPIIPR
301: TDRPFKTSIV FAHEKGTSVL FKVLSAFAFR DISLTKIESR PNHNRPIRVV DDANVGTAKH FEYMFYVDFE ASMAEARAQN ALAEVQEFTS FLRVLGSYPM
401: DMTPWSPTSS TSS

Arabidopsis Description

ADT6Arogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A178W954]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.