Factsheet for GSMUA_Achr1P03870_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P18150_001	Banana	plastid	70.94	68.98
Zm00001d048561_P001	Maize	plastid	63.82	57.73
TraesCS1A01G188000.1	Wheat	plastid	63.53	56.03
Os10t0523700-01	Rice	plastid	64.96	55.88
HORVU1Hr1G048860.1	Barley	plastid	63.25	55.36
TraesCS1B01G195800.2	Wheat	plastid	63.25	54.81
TraesCS1D01G188500.1	Wheat	plastid	63.25	54.55
OQU92273	Sorghum	plastid	63.25	53.11
GSMUA_Achr8P07590_001	Banana	cytosol	35.9	44.21
GSMUA_Achr10P...	Banana	plastid	21.65	36.54
GSMUA_Achr8P15920_001	Banana	cytosol	33.33	36.0
GSMUA_Achr6P15520_001	Banana	cytosol	34.47	35.59
GSMUA_Achr10P...	Banana	cytosol	34.19	34.48
GSMUA_AchrUn_...	Banana	plastid	37.04	32.66
GSMUA_Achr3P22810_001	Banana	plastid	35.9	32.23
GSMUA_Achr8P33080_001	Banana	plastid	39.6	31.88
GSMUA_Achr4P23700_001	Banana	plastid	34.47	29.51
GSMUA_Achr7P00270_001	Banana	cytosol	21.65	29.12
GSMUA_Achr3P24700_001	Banana	plastid	27.35	25.46
GSMUA_Achr8P18790_001	Banana	plastid	28.49	24.45
GSMUA_Achr5P18480_001	Banana	plastid	26.5	22.91
GSMUA_Achr6P17230_001	Banana	plastid	17.95	21.58

Protein Annotations

KEGG:00400+4.2.1.51	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	GO:GO:0003674	GO:GO:0003824
GO:GO:0004664	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009094	GO:GO:0009987
EnsemblPlantsGene:GSMUA_Achr1G03870_001	EnsemblPlants:GSMUA_Achr1P03870_001	EnsemblPlants:GSMUA_Achr1T03870_001	InterPro:IPR001086	UniProt:M0RWU5	PFAM:PF00800
ScanProsite:PS00857	PFscan:PS51171	PANTHER:PTHR21022	PANTHER:PTHR21022:SF2	InterPro:Preph_deHydtase	InterPro:Preph_deHydtase_CS
SUPFAM:SSF53850	SUPFAM:SSF55021	UniParc:UPI00029699B5	SEG:seg	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G03870_001]

Coordinates

chr1:+:3207153..3208289

Molecular Weight (calculated)

37980.8 Da

IEP (calculated)

9.111

GRAVY (calculated)

-0.015

Length

351 amino acids

Sequence
(BLAST)

001: MAFATSLKLH NPFSPTSAAT ERRDLDFPAA VYLNRRLRNP PRTVAMATVP TNDGAPRING HPHINGHAHS YAPALAPRVA FQGAPGAYSE FAAKTAVPGC
101: ATVPCRTFAD AIAAVQAGQA DRAILPVEST MEGTALRNYD LLLRHDLVIS QEVNLFVHYC LLAMPGVRPA ELRRDTAGAV EMLRSHRLLD TAAIASPRAA
201: LLYGLDVLAD GLQDESWNVT RFLLLSPKSS TSSATPPLPP PNPKTSMVIA HRGGSMVVLL KVLSAFSRRN INLTKLEIIN SSAVENKAPV MILDIRGKGS
301: LRAFPHVLYV DFEGSKEDPR AKEAIDEISQ FSVFVRILGC YAANPNVYDL Q

Best Arabidopsis Sequence Match ( AT1G08250.1 )
(BLAST)

001: MKALSSSSPI LGASQPATAT ALIARSGRSE WQSSCAILTS KVISQEESES LPVPPVSGGV DHLNGHNSAA ARVPGMNLVP IEKSDSNPLV PQHRHNPLKP
101: LSMTDLSPAP MHGSNLRVAY QGVPGAYSEA AAGKAYPNCQ AIPCDQFEVA FQAVELWIAD RAVLPVENSL GGSIHRNYDL LLRHRLHIVG EVQLPVHHCL
201: LALPGVRKEF LTRVISHPQG LAQCEHTLTK LGLNVAREAV DDTAGAAEFI ASNNLRDTAA IASARAAEIY GLEILEDGIQ DDVSNVTRFV MLAREPIIPR
301: TDRPFKTSIV FAHEKGTSVL FKVLSAFAFR DISLTKIESR PNHNRPIRVV DDANVGTAKH FEYMFYVDFE ASMAEARAQN ALAEVQEFTS FLRVLGSYPM
401: DMTPWSPTSS TSS

Arabidopsis Description

ADT6Arogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A178W954]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.