CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048561_P001	Maize	plastid	84.69	91.24
TraesCS1A01G188000.1	Wheat	plastid	77.27	81.16
Os10t0523700-01	Rice	plastid	78.47	80.39
HORVU1Hr1G048860.1	Barley	plastid	77.03	80.3
TraesCS1B01G195800.2	Wheat	plastid	77.03	79.51
TraesCS1D01G188500.1	Wheat	plastid	77.03	79.12
GSMUA_Achr1P03870_001	Banana	plastid	53.11	63.25
GSMUA_Achr3P18150_001	Banana	plastid	53.83	62.33
EER95050	Sorghum	plastid	34.69	37.66
EER96348	Sorghum	plastid	38.04	36.3
EES10725	Sorghum	plastid	36.36	35.19

Protein Annotations

KEGG:00400+4.2.1.51	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	UniProt:A0A1Z5S8L7	GO:GO:0003674
GO:GO:0003824	GO:GO:0004664	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009094
GO:GO:0009987	InterPro:IPR001086	EnsemblPlants:OQU92273	ProteinID:OQU92273	ProteinID:OQU92273.1	PFAM:PF00800
ScanProsite:PS00857	PFscan:PS51171	PANTHER:PTHR21022	PANTHER:PTHR21022:SF2	InterPro:Preph_deHydtase	InterPro:Preph_deHydtase_CS
EnsemblPlantsGene:SORBI_3001G320700	SUPFAM:SSF53850	UniParc:UPI000B42403F	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:+:60835973..60838267

Molecular Weight (calculated)

43701.5 Da

IEP (calculated)

9.004

GRAVY (calculated)

-0.002

Length

418 amino acids

Sequence
(BLAST)

001: MAYTSSLHLP KHLLLPSPRR TRHRRPSSFV PVSAAANKIN GGVNGHHAPE KPALPNGKAP QHINGHGNGH GKKGVNGHVN GRHAGNNRIH LSVSTGGGGG
101: QDGSGLRVAF QGAPGAYSEF AAKTALPGCE TVPCRAFADA LAAVERGAAD RAVLPVESTM EGTALRNYDL LLRHGLVVVQ EINLFVHYCL LAMPGVRAAE
201: VRRVISHPMA LAHCGRALAR LGVDPEPVED TAGAVEMLRS GRMLDTAAIA SPRAADLYGL DVLAHGLQDE SWNVTRFLLL SRPSAVAALP VDAAAGGATK
301: TSMVVAHRGG SMMVVLKVLS AFSSRGINLT KLEVINNDGA AAADAGSGAG ARPPVVILDT SARGKPTLRA FPHVLYVDCE GAAHDPRVHE AIQEIETFAV
401: FVRVLGCYAA DSTVYDLQ

Best Arabidopsis Sequence Match ( AT2G27820.1 )
(BLAST)

001: MRTLLPSHTP ATVTTAARRR HVIHCAGKRS DSFSINSSSS DWQSSCAILS SKVNSQEQSE SLSSNSNGSS SYHVSAVNGH NNGAGVSDLN LVPFNNNQSI
101: QSKKPLSISD LSPAPMHGSN LRVAYQGVPG AYSEAAAGKA YPNCQAIPCD QFEVAFQAVE LWIADRAVLP VENSLGGSIH RNYDLLLRHR LHIVGEVQLP
201: VHHCLIALPG VRKEFLTRVI SHPQGLAQCE HTLTKLGLNV AREAVDDTAG AAEFIAANNI RDTAAIASAR AAEIYGLEIL EDGIQDDASN VTRFVMLARE
301: PIIPRTDRPF KTSIVFAHEK GTCVLFKVLS AFAFRNISLT KIESRPNHNV PIRLVDEANV GTAKHFEYMF YIDFEASMAE SRAQNALSEV QEFTSFLRVL
401: GSYPMDMTSW SPSSSSSSSS TFSL

Arabidopsis Description

ADT3Arogenate dehydratase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUY3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.