Factsheet for HORVU1Hr1G048860.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G188000.1	Wheat	plastid	98.0	98.74
TraesCS1B01G195800.2	Wheat	plastid	97.76	96.79
TraesCS1D01G188500.1	Wheat	plastid	97.76	96.31
Zm00001d048561_P001	Maize	plastid	81.05	83.76
Os10t0523700-01	Rice	plastid	83.79	82.35
OQU92273	Sorghum	plastid	80.3	77.03
GSMUA_Achr1P03870_001	Banana	plastid	55.36	63.25
GSMUA_Achr3P18150_001	Banana	plastid	54.86	60.94
HORVU2Hr1G072210.1	Barley	cytosol, mitochondrion, plastid	35.16	39.83
HORVU5Hr1G092190.1	Barley	plastid	37.91	35.68
HORVU4Hr1G057140.3	Barley	plastid	34.91	35.09
HORVU4Hr1G057130.1	Barley	cytosol	7.73	32.63
HORVU2Hr1G072180.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	37.16	32.39
HORVU2Hr1G013500.1	Barley	nucleus	31.17	30.79
HORVU3Hr1G041870.1	Barley	plastid	9.23	26.81
HORVU1Hr1G023740.1	Barley	plastid	9.98	26.67
HORVU6Hr1G060430.1	Barley	plastid	8.73	26.32

Protein Annotations

KEGG:00400+4.2.1.51	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	EMBL:AK353973	EMBL:AK354170
EMBL:AK360416	EMBL:AK363544	EMBL:AK364710	EMBL:AK366543	EMBL:AK374287	UniProt:F2CQS1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004664	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009094	GO:GO:0009987	EnsemblPlantsGene:HORVU1Hr1G048860	EnsemblPlants:HORVU1Hr1G048860.1	InterPro:IPR001086	PFAM:PF00800
ScanProsite:PS00857	PFscan:PS51171	PANTHER:PTHR21022	PANTHER:PTHR21022:SF2	InterPro:Preph_deHydtase	InterPro:Preph_deHydtase_CS
SUPFAM:SSF53850	SUPFAM:SSF55021	UniParc:UPI0002004645	SEG:seg	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CQS1]

Coordinates

chrchr1H:-:362735474..362737799

Molecular Weight (calculated)

42605.5 Da

IEP (calculated)

8.778

GRAVY (calculated)

-0.027

Length

401 amino acids

Sequence
(BLAST)

001: MAYTSSLHLS KHLLLPKPHR ARPSSSRSPS FVRAARAVNG APHVNGHSKK APNGKVQING AGADGKKGPG VINGKTHVNG HDRIHLSVTT GGGGQDGTGL
101: RVAYQGAPGA YSEFAAKTAL PGCETVPCRA FADALAAVDR GLVHRAILPV ESTMEGTALR NYDLLLRHDL VVAQEINLFV HYCLLAMPGV RATEVRRVIS
201: HPMALAHCGR ALARLGVDRE PVEDTAGAVE MLRSNMMLDT AAIASPRAAD LYGLDVLAHG LQDESWNVTR FLLLSKPPSP VPVPVDADAK TSMVVAHRGG
301: SMAVVLKVLS AFSSRNINMS KLEVINNEGG VGEPRPPVMI LDTGARGAPT LRAFPHVLYV DCEGAADDPL VREAIKEIEK FAVFVRVLGC YAADTNVYDL
401: Q

Best Arabidopsis Sequence Match ( AT1G08250.1 )
(BLAST)

001: MKALSSSSPI LGASQPATAT ALIARSGRSE WQSSCAILTS KVISQEESES LPVPPVSGGV DHLNGHNSAA ARVPGMNLVP IEKSDSNPLV PQHRHNPLKP
101: LSMTDLSPAP MHGSNLRVAY QGVPGAYSEA AAGKAYPNCQ AIPCDQFEVA FQAVELWIAD RAVLPVENSL GGSIHRNYDL LLRHRLHIVG EVQLPVHHCL
201: LALPGVRKEF LTRVISHPQG LAQCEHTLTK LGLNVAREAV DDTAGAAEFI ASNNLRDTAA IASARAAEIY GLEILEDGIQ DDVSNVTRFV MLAREPIIPR
301: TDRPFKTSIV FAHEKGTSVL FKVLSAFAFR DISLTKIESR PNHNRPIRVV DDANVGTAKH FEYMFYVDFE ASMAEARAQN ALAEVQEFTS FLRVLGSYPM
401: DMTPWSPTSS TSS

Arabidopsis Description

ADT6Arogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A178W954]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.