Factsheet for HORVU2Hr1G072180.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol, golgi, plasma membrane, vacuole, endoplasmic reticulum, plastid

Predictor Summary:

extracellular 2
golgi 2
plasma membrane 2
endoplasmic reticulum 2
vacuole 2
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid, secretory
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	cytosol
TargetP:	secretory
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G072180.1
HORVU2Hr1G072210.1
HORVU5Hr1G092190.1
HORVU6Hr1G091500.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G44720.1	HORVU2Hr1G072180.1	AT3G44720.1	21798944
AT3G44720.1	HORVU2Hr1G072210.1	AT3G44720.1	21798944
AT3G44720.1	HORVU5Hr1G092190.1	AT3G44720.1	21798944
AT3G44720.1	HORVU6Hr1G091500.1	AT3G54826.1	21798944
AT5G22630.1	HORVU2Hr1G072180.1	AT3G44720.1	21798944
AT5G22630.1	HORVU2Hr1G072210.1	AT3G44720.1	21798944
AT5G22630.1	HORVU5Hr1G092190.1	AT3G44720.1	21798944
AT5G22630.1	HORVU2Hr1G072180.1	AT5G22630.1	21798944
AT5G22630.1	HORVU2Hr1G072210.1	AT5G22630.1	21798944
AT5G22630.1	HORVU5Hr1G092190.1	AT5G22630.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G308400.1	Wheat	plastid	86.96	95.47
TraesCS2D01G289900.2	Wheat	plastid	85.65	94.71
TraesCS2A01G291900.1	Wheat	plastid	91.3	90.32
Zm00001d025333_P001	Maize	plastid	72.83	79.95
HORVU2Hr1G072210.1	Barley	cytosol, mitochondrion, plastid	61.3	79.66
Zm00001d003830_P001	Maize	plastid	73.7	79.58
EES10725	Sorghum	plastid	73.7	78.47
Os04t0406600-01	Rice	plastid	73.7	77.75
VIT_06s0061g01300.t01	Wine grape	mitochondrion, plastid	62.61	70.07
HORVU5Hr1G092190.1	Barley	plastid	64.78	69.95
CDY06307	Canola	cytosol	58.7	68.53
Bra031620.1-P	Field mustard	cytosol	58.26	68.02
AT1G08250.1	Thale cress	plastid	60.87	67.8
KRH26581	Soybean	plastid	62.39	67.53
KRH22725	Soybean	plastid	62.17	67.45
GSMUA_Achr10P...	Banana	plastid	30.22	66.83
CDY30526	Canola	plastid	60.65	66.75
Bra034372.1-P	Field mustard	plastid	60.65	66.75
PGSC0003DMT400018339	Potato	plastid	62.61	66.51
Solyc06g074530.1.1	Tomato	plastid	62.39	66.28
PGSC0003DMT400068261	Potato	plastid	62.17	66.05
Solyc11g066890.1.1	Tomato	plastid	61.3	66.04
CDX77139	Canola	plastid	60.65	65.49
AT2G27820.1	Thale cress	plastid	60.22	65.33
CDY22691	Canola	cytosol	59.13	65.07
KRH30513	Soybean	plastid	60.0	64.49
KRH25168	Soybean	plastid	59.78	64.25
AT3G44720.1	Thale cress	plastid	58.04	62.97
CDY09152	Canola	plastid	57.61	62.35
CDY72678	Canola	plastid	56.74	62.29
CDY22692	Canola	plastid	56.74	62.29
Bra031619.1-P	Field mustard	plastid	56.52	62.05
CDY59281	Canola	plastid	57.17	61.88
CDX92343	Canola	plastid	57.17	61.88
AT5G22630.1	Thale cress	plastid	56.96	61.65
CDY26946	Canola	plastid	56.74	61.41
Bra020203.1-P	Field mustard	plastid	57.61	61.34
Bra002423.1-P	Field mustard	plastid	57.17	60.88
Bra019468.1-P	Field mustard	plastid	50.87	60.62
CDY30932	Canola	plastid	50.43	60.1
CDX77841	Canola	plastid	50.22	59.69
HORVU4Hr1G057140.3	Barley	plastid	43.26	49.87
HORVU4Hr1G057130.1	Barley	cytosol	9.78	47.37
HORVU2Hr1G013500.1	Barley	nucleus	40.43	45.81
HORVU1Hr1G048860.1	Barley	plastid	32.39	37.16
HORVU3Hr1G041870.1	Barley	plastid	8.91	29.71
HORVU6Hr1G060430.1	Barley	plastid	8.26	28.57
HORVU1Hr1G023740.1	Barley	plastid	8.91	27.33

Protein Annotations

KEGG:00400+4.2.1.51	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	UniProt:A0A287IEM7	InterPro:ACT_dom
GO:GO:0003674	GO:GO:0003824	GO:GO:0004664	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009094	GO:GO:0009987	EnsemblPlantsGene:HORVU2Hr1G072180	EnsemblPlants:HORVU2Hr1G072180.1	InterPro:IPR001086	InterPro:IPR002912
PFAM:PF00800	ScanProsite:PS00857	PFscan:PS51171	PFscan:PS51671	PANTHER:PTHR21022	PANTHER:PTHR21022:SF13
InterPro:Preph_deHydtase	InterPro:Preph_deHydtase_CS	SUPFAM:SSF53850	SUPFAM:SSF55021	UniParc:UPI000B46E184	SEG:seg

Description

No Description!

Coordinates

chrchr2H:-:516922164..516923941

Molecular Weight (calculated)

49220.6 Da

IEP (calculated)

6.192

GRAVY (calculated)

0.006

Length

460 amino acids

Sequence
(BLAST)

001: PFHNPFPSQL LAFEAAPATS FSFLVSYQQI ATEEEELIGM AVVNIVKPPI GQSPNLQGRA PRRGSVVVRS SLQGAVVGNR TEWLTSCAVL SSKVAALAPH
101: STNGHLALAA AAASNGAVLD LDPVKTINGS ARNLPAPLRI ADLSPAPMHG SELRVAYQGM PGAYSEKASV KAYPGSDAIP CDQFEVAFQA VENWIADRAV
201: LPVENSLGGS IHRNYDLLLR HRLHIVGEVQ LPVHHCLLAL PGVRKEDVTR VISHPQALAQ CEHTLTRMAG LNAAREAFDD TAGAAEYVAA NGLRDTAAIA
301: SSRAAELYGM EVLADGIQDD SGNVTRFVML AREPIVPRMD LPFKTSIVFA HDKEGTSVLF KVLSAFAFRD ISLTKIDSRP HRPIRLAADD AGSGTAPKQF
401: EYMFYVDFQA SLADPRVQNA LAEVQEFTSF LRVLGSYPMD MTPMAAGVAS SDSSSAYSSS

Best Arabidopsis Sequence Match ( AT2G27820.1 )
(BLAST)

001: MRTLLPSHTP ATVTTAARRR HVIHCAGKRS DSFSINSSSS DWQSSCAILS SKVNSQEQSE SLSSNSNGSS SYHVSAVNGH NNGAGVSDLN LVPFNNNQSI
101: QSKKPLSISD LSPAPMHGSN LRVAYQGVPG AYSEAAAGKA YPNCQAIPCD QFEVAFQAVE LWIADRAVLP VENSLGGSIH RNYDLLLRHR LHIVGEVQLP
201: VHHCLIALPG VRKEFLTRVI SHPQGLAQCE HTLTKLGLNV AREAVDDTAG AAEFIAANNI RDTAAIASAR AAEIYGLEIL EDGIQDDASN VTRFVMLARE
301: PIIPRTDRPF KTSIVFAHEK GTCVLFKVLS AFAFRNISLT KIESRPNHNV PIRLVDEANV GTAKHFEYMF YIDFEASMAE SRAQNALSEV QEFTSFLRVL
401: GSYPMDMTSW SPSSSSSSSS TFSL

Arabidopsis Description

ADT3Arogenate dehydratase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUY3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.