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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:plastid
ChloroP:plastid
MultiLoc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G045100.1
TraesCS2A01G291900.1
TraesCS2A01G292000.1
TraesCS2B01G057300.1
TraesCS2B01G308400.1
TraesCS2B01G308500.1
TraesCS2D01G043700.1
TraesCS2D01G289900.2
TraesCS2D01G290000.1
TraesCS5A01G370200.1
TraesCS5B01G372500.1
TraesCS5D01G379700.1
TraesCS6A01G395100.1
TraesCS6B01G435000.1
TraesCS6D01G380400.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G44720.1 TraesCS2A01G291900.1 AT3G44720.1 21798944
AT3G44720.1 TraesCS2A01G292000.1 AT3G44720.1 21798944
AT3G44720.1 TraesCS2B01G308400.1 AT3G44720.1 21798944
AT3G44720.1 TraesCS2B01G308500.1 AT3G44720.1 21798944
AT3G44720.1 TraesCS2D01G289900.2 AT3G44720.1 21798944
AT3G44720.1 TraesCS2D01G290000.1 AT3G44720.1 21798944
AT3G44720.1 TraesCS5A01G370200.1 AT3G44720.1 21798944
AT3G44720.1 TraesCS5B01G372500.1 AT3G44720.1 21798944
AT3G44720.1 TraesCS5D01G379700.1 AT3G44720.1 21798944
AT3G44720.1 TraesCS6A01G395100.1 AT3G54826.1 21798944
AT3G44720.1 TraesCS6B01G435000.1 AT3G54826.1 21798944
AT3G44720.1 TraesCS6D01G380400.1 AT3G54826.1 21798944
AT3G44720.1 TraesCS2A01G045100.1 AT5G65683.1 21798944
AT3G44720.1 TraesCS2B01G057300.1 AT5G65683.1 21798944
AT3G44720.1 TraesCS2D01G043700.1 AT5G65683.1 21798944
AT5G22630.1 TraesCS2A01G291900.1 AT3G44720.1 21798944
AT5G22630.1 TraesCS2A01G292000.1 AT3G44720.1 21798944
AT5G22630.1 TraesCS2B01G308400.1 AT3G44720.1 21798944
AT5G22630.1 TraesCS2B01G308500.1 AT3G44720.1 21798944
AT5G22630.1 TraesCS2D01G289900.2 AT3G44720.1 21798944
AT5G22630.1 TraesCS2D01G290000.1 AT3G44720.1 21798944
AT5G22630.1 TraesCS5A01G370200.1 AT3G44720.1 21798944
AT5G22630.1 TraesCS5B01G372500.1 AT3G44720.1 21798944
AT5G22630.1 TraesCS5D01G379700.1 AT3G44720.1 21798944
AT5G22630.1 TraesCS2A01G291900.1 AT5G22630.1 21798944
AT5G22630.1 TraesCS2A01G292000.1 AT5G22630.1 21798944
AT5G22630.1 TraesCS2B01G308400.1 AT5G22630.1 21798944
AT5G22630.1 TraesCS2B01G308500.1 AT5G22630.1 21798944
AT5G22630.1 TraesCS2D01G289900.2 AT5G22630.1 21798944
AT5G22630.1 TraesCS2D01G290000.1 AT5G22630.1 21798944
AT5G22630.1 TraesCS5A01G370200.1 AT5G22630.1 21798944
AT5G22630.1 TraesCS5B01G372500.1 AT5G22630.1 21798944
AT5G22630.1 TraesCS5D01G379700.1 AT5G22630.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G289900.2 Wheat plastid 96.9 97.6
TraesCS2A01G291900.1 Wheat plastid 96.66 87.1
HORVU2Hr1G072180.1 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole 95.47 86.96
TraesCS2B01G308500.1 Wheat plastid 82.1 83.09
Zm00001d025333_P001 Maize plastid 80.19 80.19
Zm00001d003830_P001 Maize plastid 81.15 79.81
EES10725 Sorghum plastid 81.15 78.7
Os04t0406600-01 Rice plastid 81.62 78.44
VIT_06s0061g01300.t01 Wine grape mitochondrion, plastid 69.93 71.29
TraesCS5B01G372500.1 Wheat plastid 71.36 71.19
CDY06307 Canola cytosol 65.39 69.54
Bra031620.1-P Field mustard cytosol 65.16 69.29
AT1G08250.1 Thale cress plastid 68.26 69.25
KRH26581 Soybean plastid 69.45 68.47
KRH22725 Soybean plastid 69.21 68.4
CDY30526 Canola plastid 68.02 68.18
Bra034372.1-P Field mustard plastid 68.02 68.18
Solyc06g074530.1.1 Tomato plastid 70.17 67.9
PGSC0003DMT400018339 Potato plastid 70.17 67.9
Solyc11g066890.1.1 Tomato plastid 68.5 67.21
PGSC0003DMT400068261 Potato plastid 69.45 67.21
CDX77139 Canola plastid 68.02 66.9
GSMUA_Achr10P... Banana plastid 33.17 66.83
AT2G27820.1 Thale cress plastid 67.54 66.75
CDY22691 Canola cytosol 65.63 65.79
KRH30513 Soybean plastid 66.83 65.42
KRH25168 Soybean plastid 66.59 65.19
AT3G44720.1 Thale cress plastid 64.44 63.68
CDX92343 Canola plastid 63.96 63.06
CDY72678 Canola plastid 63.01 63.01
CDY09152 Canola plastid 63.72 62.82
AT5G22630.1 Thale cress plastid 63.72 62.82
CDY22692 Canola plastid 62.77 62.77
Bra031619.1-P Field mustard plastid 62.77 62.77
CDY26946 Canola plastid 63.48 62.59
CDY59281 Canola plastid 63.25 62.35
Bra002423.1-P Field mustard plastid 63.96 62.04
Bra020203.1-P Field mustard plastid 63.72 61.81
Bra019468.1-P Field mustard plastid 56.56 61.4
CDY30932 Canola plastid 55.85 60.62
CDX77841 Canola plastid 55.85 60.47
TraesCS2B01G096300.1 Wheat plastid 47.97 52.89
TraesCS4B01G197700.1 Wheat plastid 44.87 47.24
TraesCS1B01G195800.2 Wheat plastid 35.32 36.54
Protein Annotations
KEGG:00400+4.2.1.51Gene3D:3.30.70.260Gene3D:3.40.190.10MapMan:4.1.5.2.4InterPro:ACT_domGO:GO:0003674
GO:GO:0003824GO:GO:0004664GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009094
GO:GO:0009987InterPro:IPR001086InterPro:IPR002912PFAM:PF00800ScanProsite:PS00857ScanProsite:PS00858
PFscan:PS51171PFscan:PS51671PANTHER:PTHR21022PANTHER:PTHR21022:SF13InterPro:Preph_deHydtaseInterPro:Preph_deHydtase_CS
SUPFAM:SSF53850SUPFAM:SSF55021EnsemblPlantsGene:TraesCS2B01G308400EnsemblPlants:TraesCS2B01G308400.1TIGR:cd04905TIGR:cd13631
SEG:seg:::::
Description
No Description!
Coordinates
chr2B:-:441479117..441480376
Molecular Weight (calculated)
44925.6 Da
IEP (calculated)
6.959
GRAVY (calculated)
-0.034
Length
419 amino acids
Sequence
(BLAST)
001: MAVVNFVKPT IGQSPKLQGR TPRRGSGMVR SSLQGAVVGN RTEWLTSCAV LSSKVAALAP HSTNSHLALA VAASNGAVLD LVPVKTVDGS ARSLPAPLRI
101: ADLSPAPMHG SELRVAYQGV PGAYSEKASG KAYPGSDAIP CDQFEVAFQA VENWIADRAV LPVENSLGGS IHRNYDLLLR HRLHIVGEVQ LPVHHCLLAL
201: PGVRKEDITR VISHPQALAQ CEHTLTRMAG LNAAREAFDD TAGAAEYVAA NGLRDTAAIA SSRAAELYGM EVLADGIQDD SGNVTRFVML AREPIVPRMD
301: RPFKTSIVFA HDKEGTSVLF KVLSAFAFRD ISLTKIESRP HRPIRLVDDA DSGTAPKQFE YMFYVDFQAS LADPRVQNAL AEVQEFTSFL RVLGSYPMDM
401: TPMAAGVASS DSSSAYSSS
Best Arabidopsis Sequence Match ( AT3G44720.1 )
(BLAST)
001: MQAATSCDLK FRSTDPTSRN KCFSHAIPKR VAVTCGYRSE SFSFPNGVSV SRSDWQSSCA ILSSKVASVE NTGGLADKIA AVNGHTNGSV NLGLVAVEST
101: NGKLAPAQPL TITDLSPAPL HGSSLRVAYQ GVPGAYSEAA AGKAYPNCDA IPCDQFDVAF QAVELWIADR AVLPVENSLG GSIHRNYDLL LRHRLHIVGE
201: VQIPVHHCLL ALPGVRTDCV SRVISHPQAL AQTEHSLDVL TPHAAREAFH DTAAAAEYIS ANDLHDTAAV ASARAAELYN LQILADGIQD DPGNVTRFLM
301: LAREPIIPRT DRPFKTSIVF AAQEHKGTSV LFKVLSAFAF RDISLTKIES RPHHNRPLRV VGDGSFGTSK NFEYMFYVDF EASMAEPRAQ NALAEVQEYT
401: SFLRVLGSYP MDMTPWSMTS TEEA
Arabidopsis Description
ADT4Arogenate dehydratase 4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22241]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.