Factsheet for TraesCS4B01G197700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G198200.1	Wheat	plastid	94.47	94.47
TraesCS4A01G106600.1	Wheat	plastid	92.96	93.2
HORVU4Hr1G057130.1	Barley	cytosol	17.84	74.74
Os03t0286200-01	Rice	plastid	70.85	70.68
EER95050	Sorghum	plastid	67.59	69.87
TraesCS2B01G096300.1	Wheat	plastid	64.32	67.37
Zm00001d047755_P006	Maize	plastid	64.07	65.05
GSMUA_Achr10P...	Banana	cytosol	54.02	61.78
GSMUA_Achr6P15520_001	Banana	cytosol	52.01	60.88
Zm00001d028712_P007	Maize	plastid	64.07	59.58
CDY28030	Canola	plastid	53.77	56.91
CDX74036	Canola	plastid	54.02	56.73
Bra001262.1-P	Field mustard	plastid	53.52	56.2
Bra029665.1-P	Field mustard	plastid	53.52	56.2
CDY35951	Canola	plastid	53.27	55.94
CDY07984	Canola	plastid	53.27	55.94
VIT_06s0004g03430.t01	Wine grape	plastid	54.52	55.93
AT3G07630.3	Thale cress	plastid	53.27	55.64
KRH24944	Soybean	plastid	42.96	55.16
KRG89060	Soybean	plastid	53.02	54.81
PGSC0003DMT400065276	Potato	plastid	54.02	54.29
Solyc11g072520.1.1	Tomato	plastid	52.26	52.93
TraesCS2B01G308500.1	Wheat	plastid	47.74	45.89
TraesCS5B01G372500.1	Wheat	plastid	47.49	45.0
TraesCS2B01G308400.1	Wheat	plastid	47.24	44.87
TraesCS1B01G195800.2	Wheat	plastid	34.42	33.83

Protein Annotations

KEGG:00400+4.2.1.51	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	InterPro:ACT_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0004664	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009094
GO:GO:0009987	InterPro:IPR001086	InterPro:IPR002912	PFAM:PF00800	ScanProsite:PS00857	ScanProsite:PS00858
PFscan:PS51171	PFscan:PS51671	PANTHER:PTHR21022	PANTHER:PTHR21022:SF3	InterPro:Preph_deHydtase	InterPro:Preph_deHydtase_CS
SUPFAM:SSF53850	SUPFAM:SSF55021	EnsemblPlantsGene:TraesCS4B01G197700	EnsemblPlants:TraesCS4B01G197700.1	TIGR:cd04905	TIGR:cd13631
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4B:-:426142885..426145863

Molecular Weight (calculated)

43331.9 Da

IEP (calculated)

6.669

GRAVY (calculated)

-0.103

Length

398 amino acids

Sequence
(BLAST)

001: MASMTTPRLP FLPARTCSAA AAFSSLSSSP LQCCPVKRTS VTNANSAPLL STSRPGAPAA DGVGAADLNR LRASAMPVAD SPLPAYCNPH ELPRPLTSAA
101: LMESSGEGLK VAYQGFPGAY SESAAKKAYP HCQTVPCEHF DTAFQAVENY TVDRAVLSLE NTLGGSIHRN YDLLLRHELH IVGDVRLAVR HCLLANRGVK
201: IGNLRSVMSH PQALAQCEHT LTELGIEQRQ AVDDTAGAAK LVTEQMLQDT GAVASSLAAE LYGLDILAEN IQDEKENVTR FMMLAREPIV PQIDKPFKTS
301: IVFSLEDWKP AQLLKALAIF ALRDINLTKI ESRPHKKRPF RVADDTFSTP VKYFNYLFYV DLEASMADQK TLKALGNLEE FAPFVRVLGS YPTDVSEV

Best Arabidopsis Sequence Match ( AT1G08250.1 )
(BLAST)

001: MKALSSSSPI LGASQPATAT ALIARSGRSE WQSSCAILTS KVISQEESES LPVPPVSGGV DHLNGHNSAA ARVPGMNLVP IEKSDSNPLV PQHRHNPLKP
101: LSMTDLSPAP MHGSNLRVAY QGVPGAYSEA AAGKAYPNCQ AIPCDQFEVA FQAVELWIAD RAVLPVENSL GGSIHRNYDL LLRHRLHIVG EVQLPVHHCL
201: LALPGVRKEF LTRVISHPQG LAQCEHTLTK LGLNVAREAV DDTAGAAEFI ASNNLRDTAA IASARAAEIY GLEILEDGIQ DDVSNVTRFV MLAREPIIPR
301: TDRPFKTSIV FAHEKGTSVL FKVLSAFAFR DISLTKIESR PNHNRPIRVV DDANVGTAKH FEYMFYVDFE ASMAEARAQN ALAEVQEFTS FLRVLGSYPM
401: DMTPWSPTSS TSS

Arabidopsis Description

ADT6Arogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A178W954]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.