Factsheet for TraesCS2B01G096300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G080100.1	Wheat	plastid	96.58	96.07
TraesCS2A01G082200.1	Wheat	plastid	97.11	95.1
Os07t0694600-01	Rice	plastid	81.84	85.44
HORVU2Hr1G013500.1	Barley	nucleus	72.89	68.23
GSMUA_Achr10P...	Banana	cytosol	60.53	66.09
GSMUA_Achr6P15520_001	Banana	cytosol	58.95	65.88
TraesCS4B01G197700.1	Wheat	plastid	67.37	64.32
CDY28030	Canola	plastid	62.37	63.03
Bra029665.1-P	Field mustard	plastid	62.37	62.53
CDY35951	Canola	plastid	62.37	62.53
CDX74036	Canola	plastid	61.84	62.01
AT3G07630.3	Thale cress	plastid	61.84	61.68
Bra001262.1-P	Field mustard	plastid	61.32	61.48
CDY07984	Canola	plastid	61.05	61.21
VIT_06s0004g03430.t01	Wine grape	plastid	61.05	59.79
KRH24944	Soybean	plastid	48.68	59.68
KRG89060	Soybean	plastid	60.26	59.48
PGSC0003DMT400065276	Potato	plastid	61.58	59.09
Solyc11g072520.1.1	Tomato	plastid	58.95	57.0
TraesCS2B01G308500.1	Wheat	plastid	55.0	50.48
TraesCS5B01G372500.1	Wheat	plastid	55.53	50.24
TraesCS2B01G308400.1	Wheat	plastid	52.89	47.97
TraesCS1B01G195800.2	Wheat	plastid	35.53	33.33

Protein Annotations

KEGG:00400+4.2.1.51	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	InterPro:ACT_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0004664	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009094	GO:GO:0009507	GO:GO:0009536
GO:GO:0009987	GO:GO:0047769	InterPro:IPR001086	InterPro:IPR002912	PFAM:PF00800	ScanProsite:PS00857
ScanProsite:PS00858	PFscan:PS51171	PFscan:PS51671	PANTHER:PTHR21022	PANTHER:PTHR21022:SF3	InterPro:Preph_deHydtase
InterPro:Preph_deHydtase_CS	SUPFAM:SSF53850	SUPFAM:SSF55021	EnsemblPlantsGene:TraesCS2B01G096300	EnsemblPlants:TraesCS2B01G096300.1	TIGR:cd04905
TIGR:cd13631	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2B:+:56522161..56524485

Molecular Weight (calculated)

41316.1 Da

IEP (calculated)

6.740

GRAVY (calculated)

-0.266

Length

380 amino acids

Sequence
(BLAST)

001: MAAASSSLRI PAPTHHPAAG ARPRRLPFHA VSVRPRRSAV SASSSPQQGD GDDADGPAGV PVPVPFPRDS AIALPRPLTS ADLMGEASGE GLRVAYQGCP
101: GAYSEAAARK AYPSCETVPC EYFETAFQAV EKWAADRAVL PLENSLGGSI HRNYDLLLRH RLHIVGEVRL AVRHCLLANR GVKIENLRSA MSHPQALAQC
201: EQTLTQLGIE HREAVDDTAG AAKQIAEENL QDTAAVASSL SAQLYGLDIL AENIQDDADN VTRFMMLARE PIIPRTDKPF KTSIVFSLEE GPGQLFKALA
301: VFALRKINLT KMESRPHKKR PLRVADDNST PLKHFDYLFY VDFEASMADP NAQNALSNLK QEFATFLRVL GSYPTDVTEA

Best Arabidopsis Sequence Match ( AT3G07630.3 )
(BLAST)

001: MAMHTVRLSP ATQLHGGISS NLSPPNRKPN NSIVRYGCGS SKRFRIVTVL ASLRENDANG RDNSVRAMEV KKIFEDSPLL PKPLSSNQLT ESVSNGSRVR
101: VAYQGVRGAY SESAAEKAYP NCEAVPCEEF DTAFEAVERW LVDRAVLPIE NSLGGSIHRN YDLLLRHNLH IVGEVKLAVR HCLLANHGVN IEDLRRVLSH
201: PQALAQCENT LTKLGLVREA VDDTAGAAKQ IAFENLNDAA AVASEKAAKI YGLNIVAKDI QDDCDNVTRF LMLAREPIIP GTNRLFKTSI VFSLEEGPGV
301: LFKALAVFAL RQINLTKIES RPLRKHPLRA SGGLKYFDYL FYVDFEASMA DEVAQNALRH LEEFATFLRV LGSYPVDTTM L

Arabidopsis Description

ADT2Arogenate dehydratase/prephenate dehydratase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SSE7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.