CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG89060	Soybean	plastid	95.48	76.88
GSMUA_Achr10P...	Banana	cytosol	66.13	58.91
VIT_06s0004g03430.t01	Wine grape	plastid	72.58	57.99
GSMUA_Achr6P15520_001	Banana	cytosol	62.58	57.06
CDY35951	Canola	plastid	69.35	56.73
CDY28030	Canola	plastid	68.71	56.65
Bra029665.1-P	Field mustard	plastid	69.03	56.46
AT3G07630.3	Thale cress	plastid	68.71	55.91
CDX74036	Canola	plastid	68.06	55.67
Bra001262.1-P	Field mustard	plastid	67.74	55.41
CDY07984	Canola	plastid	66.77	54.62
Solyc11g072520.1.1	Tomato	plastid	68.39	53.94
PGSC0003DMT400065276	Potato	plastid	68.39	53.54
Os07t0694600-01	Rice	plastid	58.71	50.0
EER95050	Sorghum	plastid	61.61	49.61
TraesCS2D01G080100.1	Wheat	plastid	60.65	49.21
TraesCS2B01G096300.1	Wheat	plastid	59.68	48.68
Os03t0286200-01	Rice	plastid	61.94	48.12
TraesCS2A01G082200.1	Wheat	plastid	59.68	47.68
HORVU4Hr1G057140.3	Barley	plastid	60.32	46.87
TraesCS4D01G198400.1	Wheat	plastid	60.0	46.62
TraesCS4A01G106500.1	Wheat	plastid	60.0	46.62
Zm00001d047755_P006	Maize	plastid	57.74	45.66
TraesCS4D01G198200.1	Wheat	plastid	55.48	43.22
TraesCS4B01G197700.1	Wheat	plastid	55.16	42.96
KRG93965	Soybean	cytosol	11.29	42.68
TraesCS4A01G106600.1	Wheat	plastid	54.52	42.57
KRH02054	Soybean	plastid	53.55	41.29
HORVU2Hr1G013500.1	Barley	nucleus	53.55	40.89
Zm00001d028712_P007	Maize	plastid	56.13	40.65
KRH26772	Soybean	plastid	50.0	40.36
KRH22725	Soybean	plastid	55.16	40.33
KRH26581	Soybean	plastid	55.16	40.24
KRH25168	Soybean	plastid	55.48	40.19
KRH22575	Soybean	cytosol	32.9	39.69
KRH30513	Soybean	plastid	54.19	39.25
KRH36465	Soybean	plastid	50.32	38.61
HORVU4Hr1G057130.1	Barley	cytosol	2.58	8.42

Protein Annotations

KEGG:00400+4.2.1.51	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	InterPro:ACT_dom	EMBL:ACUP02007191
EnsemblPlantsGene:GLYMA_12G072500	GO:GO:0003674	GO:GO:0003824	GO:GO:0004664	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009094
GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0047769	InterPro:IPR001086	InterPro:IPR002912
UniProt:K7LTH7	EnsemblPlants:KRH24944	ProteinID:KRH24944	ProteinID:KRH24944.1	PFAM:PF00800	ScanProsite:PS00857
PFscan:PS51171	PFscan:PS51671	PANTHER:PTHR21022	PANTHER:PTHR21022:SF3	MetaCyc:PWY-7432	InterPro:Preph_deHydtase
InterPro:Preph_deHydtase_CS	SUPFAM:SSF53850	SUPFAM:SSF55021	UniParc:UPI000295C12B	SEG:seg	:

Description

hypothetical protein

Coordinates

chr12:+:5344610..5350276

Molecular Weight (calculated)

33808.6 Da

IEP (calculated)

7.857

GRAVY (calculated)

-0.070

Length

310 amino acids

Sequence
(BLAST)

001: MAASRIVAHP PPYLHRQSPP SDAAPSLNLT LLPKRYRNLG ICASLRGDKP HSVELRATTS DVVVSRDLLS LPRPLSSTQL SASVSDGSCL RVAYQGVHGA
101: YSESAAQKAY PNCEAVPCEQ FETAFDAVER WLVDRAVLPI ENSLGGSIHR NYDLLLRHSL HIVGEVNFAV CHCLMANHGV KREDLKRVLS HPQALAQCEN
201: TLTKFGLVRE AVDDTAGAAK HVAYHKLQDA GAVASSAAAK IYGLNILDQD IQDDSDNVTR FLMLAREPII PGTDRRFKTS IVFSLEEGPG ILFKALAVFA
301: LRQINLTKVL

Best Arabidopsis Sequence Match ( AT3G07630.3 )
(BLAST)

001: MAMHTVRLSP ATQLHGGISS NLSPPNRKPN NSIVRYGCGS SKRFRIVTVL ASLRENDANG RDNSVRAMEV KKIFEDSPLL PKPLSSNQLT ESVSNGSRVR
101: VAYQGVRGAY SESAAEKAYP NCEAVPCEEF DTAFEAVERW LVDRAVLPIE NSLGGSIHRN YDLLLRHNLH IVGEVKLAVR HCLLANHGVN IEDLRRVLSH
201: PQALAQCENT LTKLGLVREA VDDTAGAAKQ IAFENLNDAA AVASEKAAKI YGLNIVAKDI QDDCDNVTRF LMLAREPIIP GTNRLFKTSI VFSLEEGPGV
301: LFKALAVFAL RQINLTKIES RPLRKHPLRA SGGLKYFDYL FYVDFEASMA DEVAQNALRH LEEFATFLRV LGSYPVDTTM L

Arabidopsis Description

ADT2Arogenate dehydratase/prephenate dehydratase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SSE7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.