Factsheet for GSMUA_Achr6P15520_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	83.24	81.32
KRG89060	Soybean	plastid	71.47	63.12
VIT_06s0004g03430.t01	Wine grape	plastid	71.76	62.89
CDY28030	Canola	plastid	69.41	62.77
KRH24944	Soybean	plastid	57.06	62.58
Bra029665.1-P	Field mustard	plastid	69.41	62.27
CDY35951	Canola	plastid	69.41	62.27
AT3G07630.3	Thale cress	plastid	69.71	62.2
GSMUA_Achr8P15920_001	Banana	cytosol	59.41	62.15
Bra001262.1-P	Field mustard	plastid	69.12	62.01
Os07t0694600-01	Rice	plastid	66.18	61.81
CDX74036	Canola	plastid	68.82	61.74
CDY07984	Canola	plastid	67.94	60.95
PGSC0003DMT400065276	Potato	plastid	69.71	59.85
TraesCS2D01G080100.1	Wheat	plastid	66.47	59.16
TraesCS2B01G096300.1	Wheat	plastid	65.88	58.95
TraesCS2A01G082200.1	Wheat	plastid	66.47	58.25
Solyc11g072520.1.1	Tomato	plastid	66.76	57.76
EER95050	Sorghum	plastid	65.0	57.4
TraesCS4A01G106500.1	Wheat	plastid	66.18	56.39
TraesCS4D01G198400.1	Wheat	plastid	66.18	56.39
Os03t0286200-01	Rice	plastid	65.59	55.89
HORVU4Hr1G057140.3	Barley	plastid	65.59	55.89
GSMUA_Achr8P07590_001	Banana	cytosol	45.88	54.74
Zm00001d047755_P006	Maize	plastid	61.76	53.57
HORVU2Hr1G013500.1	Barley	nucleus	63.53	53.2
TraesCS4D01G198200.1	Wheat	plastid	61.18	52.26
GSMUA_Achr4P23700_001	Banana	plastid	62.94	52.2
TraesCS4B01G197700.1	Wheat	plastid	60.88	52.01
TraesCS4A01G106600.1	Wheat	plastid	60.59	51.89
HORVU4Hr1G057130.1	Barley	cytosol	14.41	51.58
Zm00001d028712_P007	Maize	plastid	61.47	48.83
GSMUA_Achr10P...	Banana	plastid	29.71	48.56
GSMUA_Achr7P00270_001	Banana	cytosol	36.47	47.51
GSMUA_Achr8P33080_001	Banana	plastid	53.53	41.74
GSMUA_Achr3P22810_001	Banana	plastid	47.65	41.43
GSMUA_AchrUn_...	Banana	plastid	47.94	40.95
GSMUA_Achr1P03870_001	Banana	plastid	35.59	34.47
GSMUA_Achr3P18150_001	Banana	plastid	36.18	34.07
GSMUA_Achr8P18790_001	Banana	plastid	38.82	32.27
GSMUA_Achr5P18480_001	Banana	plastid	37.65	31.53
GSMUA_Achr6P17230_001	Banana	plastid	26.18	30.48
GSMUA_Achr3P24700_001	Banana	plastid	33.24	29.97

Protein Annotations

KEGG:00400+4.2.1.51	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	InterPro:ACT_dom	InterPro:Chor_mutase/pphenate_deHydtase
GO:GO:0003674	GO:GO:0003824	GO:GO:0004106	GO:GO:0004664	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058
GO:GO:0009073	GO:GO:0009094	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987
GO:GO:0016829	GO:GO:0047769	EnsemblPlantsGene:GSMUA_Achr6G15520_001	EnsemblPlants:GSMUA_Achr6P15520_001	EnsemblPlants:GSMUA_Achr6T15520_001	InterPro:IPR001086
InterPro:IPR002912	UniProt:M0T7A0	PFAM:PF00800	PFAM:PF01842	PIRSF:PIRSF001500	ScanProsite:PS00857
ScanProsite:PS00858	PFscan:PS51171	PFscan:PS51671	PANTHER:PTHR21022	PANTHER:PTHR21022:SF3	InterPro:Preph_deHydtase
InterPro:Preph_deHydtase_CS	SUPFAM:SSF53850	SUPFAM:SSF55021	UniParc:UPI000296B141	SEG:seg	:

Description

Arogenate dehydratase/prephenate dehydratase 2, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr6G15520_001]

Coordinates

chr6:+:10338952..10342404

Molecular Weight (calculated)

36855.1 Da

IEP (calculated)

6.424

GRAVY (calculated)

-0.063

Length

340 amino acids

Sequence
(BLAST)

001: MASNHDGVFV ASNGRSNGAG ALELRASLDD TPPDVAGPKS VSDVSDSANG YRLRVAYQGL PGAYSEAAAA KAYPDCEAVP CELFETAFDA VECMLVDRAV
101: LPIENSLGGT IHRNYDLLLR HNLHIIGEVK YAVRHCLLAN SGVKKENLKR VLSHPQALAQ CENTLAKIGV VREAVDDTAG AAKFIATHKL QDAGAVASSL
201: AAEIYGLDIL SLDIQDDPDN ITRFLMLARE PIIPVTHKPF KTSIVFSLEE GPGVLFKALA VFALRNINLT KIESRPKRTK PLRITDNGTN GRLKYFDYLF
301: FVDFEASMAS PNAQNALGHL KELATFLRVL GSYPRDMSEA

Best Arabidopsis Sequence Match ( AT3G07630.3 )
(BLAST)

001: MAMHTVRLSP ATQLHGGISS NLSPPNRKPN NSIVRYGCGS SKRFRIVTVL ASLRENDANG RDNSVRAMEV KKIFEDSPLL PKPLSSNQLT ESVSNGSRVR
101: VAYQGVRGAY SESAAEKAYP NCEAVPCEEF DTAFEAVERW LVDRAVLPIE NSLGGSIHRN YDLLLRHNLH IVGEVKLAVR HCLLANHGVN IEDLRRVLSH
201: PQALAQCENT LTKLGLVREA VDDTAGAAKQ IAFENLNDAA AVASEKAAKI YGLNIVAKDI QDDCDNVTRF LMLAREPIIP GTNRLFKTSI VFSLEEGPGV
301: LFKALAVFAL RQINLTKIES RPLRKHPLRA SGGLKYFDYL FYVDFEASMA DEVAQNALRH LEEFATFLRV LGSYPVDTTM L

Arabidopsis Description

ADT2Arogenate dehydratase/prephenate dehydratase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SSE7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.