Factsheet for GSMUA_Achr4P23700_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P15920_001	Banana	cytosol	59.51	75.08
KRH22575	Soybean	cytosol	40.73	64.98
GSMUA_Achr10P...	Banana	cytosol	55.12	64.94
GSMUA_Achr7P00270_001	Banana	cytosol	41.22	64.75
GSMUA_Achr6P15520_001	Banana	cytosol	52.2	62.94
Solyc02g080620.2.1	Tomato	plastid	60.73	62.25
VIT_10s0116g01670.t01	Wine grape	plastid	60.0	62.12
PGSC0003DMT400042492	Potato	plastid	60.49	62.0
VIT_12s0059g00750.t01	Wine grape	plastid	59.02	61.27
Bra016813.1-P	Field mustard	mitochondrion	56.1	60.05
CDY21012	Canola	mitochondrion	56.1	60.05
CDY31213	Canola	mitochondrion	55.61	59.69
KRH26772	Soybean	plastid	54.88	58.59
AT1G11790.1	Thale cress	plastid	55.85	58.42
GSMUA_Achr8P07590_001	Banana	cytosol	40.49	58.25
KRH02054	Soybean	plastid	53.66	54.73
Zm00001d021611_P001	Maize	cytosol	40.0	54.3
KRH36465	Soybean	plastid	51.95	52.72
GSMUA_Achr10P...	Banana	plastid	23.66	46.63
GSMUA_Achr8P33080_001	Banana	plastid	49.02	46.1
GSMUA_Achr3P22810_001	Banana	plastid	43.9	46.04
GSMUA_AchrUn_...	Banana	plastid	44.39	45.73
GSMUA_Achr3P18150_001	Banana	plastid	30.73	34.9
GSMUA_Achr1P03870_001	Banana	plastid	29.51	34.47
Os07t0512000-01	Rice	mitochondrion	25.85	34.19
GSMUA_Achr8P18790_001	Banana	plastid	33.17	33.25
GSMUA_Achr5P18480_001	Banana	plastid	32.93	33.25
GSMUA_Achr6P17230_001	Banana	plastid	23.66	33.22
GSMUA_Achr3P24700_001	Banana	plastid	30.0	32.63
CDY19368	Canola	cytosol	54.63	30.94

Protein Annotations

KEGG:00400+4.2.1.51	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	InterPro:ACT_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0004664	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009094
GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr4G23700_001	EnsemblPlants:GSMUA_Achr4P23700_001	EnsemblPlants:GSMUA_Achr4T23700_001	InterPro:IPR001086	InterPro:IPR002912
UniProt:M0SRI1	PFAM:PF00800	ScanProsite:PS00858	PFscan:PS51171	PFscan:PS51671	PANTHER:PTHR21022
PANTHER:PTHR21022:SF12	InterPro:Preph_deHydtase	InterPro:Preph_deHydtase_CS	SUPFAM:SSF53850	SUPFAM:SSF55021	UniParc:UPI00029564E6
SEG:seg	:	:	:	:	:

Description

Arogenate dehydratase/prephenate dehydratase 1, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr4G23700_001]

Coordinates

chr4:+:23703855..23711415

Molecular Weight (calculated)

44532.8 Da

IEP (calculated)

7.861

GRAVY (calculated)

-0.034

Length

410 amino acids

Sequence
(BLAST)

001: MASQSLAAAT AGHGGARCGR HHVGWRALPN FAAPDWRREG ARGGRLRCVG VCLKPVEDDN LSPSAAPVPA PPSRLSADQA VEESRKWGRD SGLLPKPLSL
101: TDLSVTEKGS KVRVAYQGLP GAFSEAAALK AYPQCEAVPC EQFEVAFKAV ELWLVDKAVL PIENSMDGSI HRNYDLLLCH NLHIVGEVQL SVNHCLLALP
201: GVKKDELKRV LSHPQALGQC GIALSKLGVI RESVDDTAGA AQLIALKGLR DAGAIASARA ADIYGLHILE ENVQAIFGCH CSCMLQDVPK NVLRCLVLAR
301: EPILPRTDRP FKTSIVFTLE EGPGVLFKAL GVFALRKINL TKIESRPQRN NPLRVVDDLN HGTAKYFDYL FYIDFEASMA EPRAQSALSN LQEFATFLRV
401: LGSYPMDTTL

Best Arabidopsis Sequence Match ( AT1G11790.1 )
(BLAST)

001: MALRCFPIWV CPQTTHHRSP LMGLAEFDAD KRRRFCLWEC SSSASQRAVT AIEGEIPFSR ELKKSSDELG LTQETQSLSF HRDLSMLPKP LTANSLYSSD
101: GDDSKVRISF QGIPGAYSET AALKAFPNCE TVPCEQFEAA FQAVELWLVD KAVLPIENSV GGSIHRNYDL LLRHRLHIVQ EVHLPVNHCL LGVPGVKKED
201: IKCVLSHPQA LDQCVNSLNN LGIQRISAKD TATAAQTVSS SGKIDVGAIA SVRAANIYGL DILAENIQDD VNNVTRFLIL AREPMIPRTD RPYKTSIVFS
301: LEEGPGVLFK ALAVFALRSI NLSKIESRPQ RRRPLRVVDG SNNGSAKYFD YLFYIDFEAS MADTRAQHAL GHLQEFASFI RILGCYPMDL VR

Arabidopsis Description

ADT1Arogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A178W336]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.