Factsheet for Solyc02g080620.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400042492	Potato	plastid	97.75	97.75
VIT_10s0116g01670.t01	Wine grape	plastid	70.0	70.71
CDY31213	Canola	mitochondrion	65.5	68.59
Bra016813.1-P	Field mustard	mitochondrion	65.25	68.15
CDY21012	Canola	mitochondrion	65.25	68.15
AT1G11790.1	Thale cress	plastid	66.0	67.35
GSMUA_Achr8P15920_001	Banana	cytosol	54.25	66.77
KRH02054	Soybean	plastid	66.0	65.67
GSMUA_Achr4P23700_001	Banana	plastid	62.25	60.73
KRH36465	Soybean	plastid	61.25	60.64
GSMUA_Achr7P00270_001	Banana	cytosol	34.75	53.26
Solyc11g072520.1.1	Tomato	plastid	51.5	52.42
Solyc06g074530.1.1	Tomato	plastid	55.5	51.27
Solyc11g066890.1.1	Tomato	plastid	54.0	50.59
Zm00001d021611_P001	Maize	cytosol	37.0	49.01
CDY19368	Canola	cytosol	64.5	35.64
Os07t0512000-01	Rice	mitochondrion	25.25	32.58

Protein Annotations

KEGG:00400+4.2.1.51	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	InterPro:ACT_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0004664	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009073	GO:GO:0009094
GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0016829	GO:GO:0047769
InterPro:IPR001086	InterPro:IPR002912	UniProt:K4B9T3	PFAM:PF00800	ScanProsite:PS00857	ScanProsite:PS00858
PFscan:PS51171	PFscan:PS51671	PANTHER:PTHR21022	PANTHER:PTHR21022:SF12	InterPro:Preph_deHydtase	InterPro:Preph_deHydtase_CS
SUPFAM:SSF53850	SUPFAM:SSF55021	EnsemblPlantsGene:Solyc02g080620.2	EnsemblPlants:Solyc02g080620.2.1	UniParc:UPI0002769037	:

Description

Arogenate dehydratase/prephenate dehydratase 1, chloroplastic [Source:Projected from Arabidopsis thaliana (AT1G11790) UniProtKB/Swiss-Prot;Acc:Q9SA96]

Coordinates

chr2:+:44806105..44813510

Molecular Weight (calculated)

44410.4 Da

IEP (calculated)

7.021

GRAVY (calculated)

-0.152

Length

400 amino acids

Sequence
(BLAST)

001: MALKLVPIWA CCTNQQHCCT YPQSLKLGYG SRLSGSSFLN LRAHKKWECL VLLSETERAI TPVEDEQPLA PPGDASVQEA QIIQSKGFHR DLQSLPKPLS
101: ATYLSSGQHD GSNVRVAYQG IPGAYSEAAA LKAYPKCETV PCDQFEAAFK AVELWLVDKA VLPIENSVAG SIHRNYDLLL RHRLHIVGEV QLLVNHCLLG
201: LPGIRKEELK RVVSHPQALE QCNIMLNELG VARLSSDDTS SAAQIVASEG KRDTGAVASA RAAEIYGLSI LAERIQDDPD NITRFLILAR EPIISGTDRP
301: YKTSIVFTLE EGPGVLFKAL AVFALREINL TKIESRPQKK RPLRVVDDSN KGSAKYFDYL FYIDFEASMA DPRAQYALEH LQEFARFIRV LGCYPMDKNL

Best Arabidopsis Sequence Match ( AT1G11790.1 )
(BLAST)

001: MALRCFPIWV CPQTTHHRSP LMGLAEFDAD KRRRFCLWEC SSSASQRAVT AIEGEIPFSR ELKKSSDELG LTQETQSLSF HRDLSMLPKP LTANSLYSSD
101: GDDSKVRISF QGIPGAYSET AALKAFPNCE TVPCEQFEAA FQAVELWLVD KAVLPIENSV GGSIHRNYDL LLRHRLHIVQ EVHLPVNHCL LGVPGVKKED
201: IKCVLSHPQA LDQCVNSLNN LGIQRISAKD TATAAQTVSS SGKIDVGAIA SVRAANIYGL DILAENIQDD VNNVTRFLIL AREPMIPRTD RPYKTSIVFS
301: LEEGPGVLFK ALAVFALRSI NLSKIESRPQ RRRPLRVVDG SNNGSAKYFD YLFYIDFEAS MADTRAQHAL GHLQEFASFI RILGCYPMDL VR

Arabidopsis Description

ADT1Arogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A178W336]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.