Factsheet for VIT_10s0116g01670.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
mitochondrion 4
golgi 1
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g080620.2.1	Tomato	plastid	70.71	70.0
PGSC0003DMT400042492	Potato	plastid	70.2	69.5
GSMUA_Achr8P15920_001	Banana	cytosol	54.04	65.85
KRH02054	Soybean	plastid	66.67	65.67
Bra016813.1-P	Field mustard	mitochondrion	63.38	65.54
CDY21012	Canola	mitochondrion	63.38	65.54
CDY31213	Canola	mitochondrion	63.13	65.44
VIT_12s0059g00750.t01	Wine grape	plastid	64.39	64.56
AT1G11790.1	Thale cress	plastid	63.89	64.54
GSMUA_Achr4P23700_001	Banana	plastid	62.12	60.0
KRH36465	Soybean	plastid	59.85	58.66
VIT_06s0004g03430.t01	Wine grape	plastid	54.8	55.93
GSMUA_Achr7P00270_001	Banana	cytosol	35.1	53.26
VIT_06s0061g01300.t01	Wine grape	mitochondrion, plastid	53.79	51.82
Zm00001d021611_P001	Maize	cytosol	37.12	48.68
Os07t0512000-01	Rice	mitochondrion	27.27	34.84
CDY19368	Canola	cytosol	61.62	33.7

Protein Annotations

KEGG:00400+4.2.1.51	EntrezGene:100245164	wikigene:100245164	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4
InterPro:ACT_dom	ProteinID:CBI23236	ProteinID:CBI23236.3	ncoils:Coil	UniProt:E0CVS5	EMBL:FN595248
GO:GO:0003674	GO:GO:0003824	GO:GO:0004664	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009073
GO:GO:0009094	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0016829
GO:GO:0047769	InterPro:IPR001086	InterPro:IPR002912	EntrezGene:LOC100245164	wikigene:LOC100245164	PFAM:PF00800
ScanProsite:PS00857	ScanProsite:PS00858	PFscan:PS51171	PFscan:PS51671	PANTHER:PTHR21022	PANTHER:PTHR21022:SF12
InterPro:Preph_deHydtase	InterPro:Preph_deHydtase_CS	SUPFAM:SSF53850	SUPFAM:SSF55021	UniParc:UPI00015CE13E	ArrayExpress:VIT_10s0116g01670
EnsemblPlantsGene:VIT_10s0116g01670	EnsemblPlants:VIT_10s0116g01670.t01	RefSeq:XP_002268124	RefSeq:XP_002268124.2	RefSeq:XP_010655388.1	SEG:seg

Description

Arogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:E0CVS5]

Coordinates

chr10:-:921207..926010

Molecular Weight (calculated)

43586.4 Da

IEP (calculated)

7.237

GRAVY (calculated)

-0.182

Length

396 amino acids

Sequence
(BLAST)

001: MALKTGLIWG SATPPHPHLG LADLGGRRAG RALNLRFDFE RFRKWECLAV LGQRATIPVE DEKPLRPGVE SPGGADEAKE TEPRAFHRDL NSLPRPLSAT
101: DPSSSPSNGG KVRVAYQGAP GAYSEEAAMK AYPKCEAVPC DDFEAAFKAV ELWLVEKAVL PIENSVGGSI HRNYDLLLGH RLHIVGEVQM VVNHCLLGLP
201: GVRKDELKRV LSHPQAFAQC DMTLNELGLL RISTEDTAGA AQIVASDGLK NTGAIASARA AVIYGLNILE EKIQDDCDNI TRFLILAREP IIPGLERPYK
301: TSIVFSLDEG PGVLFKALAV FALRDISLSK IESRPQRKRP LRIVDDSNKG SAKYFDYLFY IDFEASMAEP RAQYALGHLQ EFARFLRVLG CYPINR

Best Arabidopsis Sequence Match ( AT1G11790.1 )
(BLAST)

001: MALRCFPIWV CPQTTHHRSP LMGLAEFDAD KRRRFCLWEC SSSASQRAVT AIEGEIPFSR ELKKSSDELG LTQETQSLSF HRDLSMLPKP LTANSLYSSD
101: GDDSKVRISF QGIPGAYSET AALKAFPNCE TVPCEQFEAA FQAVELWLVD KAVLPIENSV GGSIHRNYDL LLRHRLHIVQ EVHLPVNHCL LGVPGVKKED
201: IKCVLSHPQA LDQCVNSLNN LGIQRISAKD TATAAQTVSS SGKIDVGAIA SVRAANIYGL DILAENIQDD VNNVTRFLIL AREPMIPRTD RPYKTSIVFS
301: LEEGPGVLFK ALAVFALRSI NLSKIESRPQ RRRPLRVVDG SNNGSAKYFD YLFYIDFEAS MADTRAQHAL GHLQEFASFI RILGCYPMDL VR

Arabidopsis Description

ADT1Arogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A178W336]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.