CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21012	Canola	mitochondrion	97.12	96.87
AT1G11790.1	Thale cress	plastid	89.01	86.73
Solyc02g080620.2.1	Tomato	plastid	68.59	65.5
PGSC0003DMT400042492	Potato	plastid	68.06	65.0
VIT_10s0116g01670.t01	Wine grape	plastid	65.44	63.13
GSMUA_Achr8P15920_001	Banana	cytosol	51.57	60.62
KRH02054	Soybean	plastid	62.83	59.7
KRH36465	Soybean	plastid	58.9	55.69
GSMUA_Achr4P23700_001	Banana	plastid	59.69	55.61
CDY28030	Canola	plastid	54.71	55.59
CDY35951	Canola	plastid	54.71	55.15
CDX74036	Canola	plastid	53.66	54.09
CDY07984	Canola	plastid	53.14	53.56
CDY06307	Canola	cytosol	51.31	49.75
CDY30526	Canola	plastid	53.4	48.8
GSMUA_Achr7P00270_001	Banana	cytosol	32.98	48.28
CDY22691	Canola	cytosol	52.62	48.09
CDX77139	Canola	plastid	53.4	47.89
CDY72678	Canola	plastid	51.57	47.02
CDX92343	Canola	plastid	51.83	46.59
CDY22692	Canola	plastid	50.79	46.3
CDY26946	Canola	plastid	51.31	46.12
CDY19368	Canola	cytosol	86.65	45.72
Zm00001d021611_P001	Maize	cytosol	36.13	45.7
CDY59281	Canola	plastid	50.52	45.41
CDX88512	Canola	plastid	14.92	45.24
CDY09152	Canola	plastid	50.0	44.94
CDX77841	Canola	plastid	43.46	42.89
CDY30932	Canola	plastid	42.67	42.23
CDX75178	Canola	cytosol	7.07	39.13
CDX98196	Canola	extracellular	8.9	36.17
Os07t0512000-01	Rice	mitochondrion	24.08	29.68

Protein Annotations

KEGG:00400+4.2.1.51	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	GO:A0A078H2Y6	UniProt:A0A078H2Y6
InterPro:ACT_dom	EnsemblPlants:CDY31213	ProteinID:CDY31213	ProteinID:CDY31213.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004664	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009073	GO:GO:0009094	GO:GO:0009507
GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0016829	GO:GO:0047769	EnsemblPlantsGene:GSBRNA2T00047343001
InterPro:IPR001086	InterPro:IPR002912	PFAM:PF00800	ScanProsite:PS00857	ScanProsite:PS00858	PFscan:PS51171
PFscan:PS51671	PANTHER:PTHR21022	PANTHER:PTHR21022:SF12	MetaCyc:PWY-7432	InterPro:Preph_deHydtase	InterPro:Preph_deHydtase_CS
SUPFAM:SSF53850	SUPFAM:SSF55021	UniPathway:UPA00121	UniParc:UPI0001B63B60	:	:

Description

BnaC08g15080DArogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A078H2Y6]

Coordinates

chrLK032269:+:20700..23941

Molecular Weight (calculated)

42058.5 Da

IEP (calculated)

7.547

GRAVY (calculated)

-0.124

Length

382 amino acids

Sequence
(BLAST)

001: MALRCLPIWV CPQTPHRYPL VGRRVSLWEC SSSPSAASQR AVTAVEGNGP ELKKASDEMG LVQEAKPVAF HRDLSMLPKP LSANSVYSSA GDDSKVRISF
101: QGIPGAYSET AALEAYPNCE TVPCEHFETA FQAAELWLVD KAVLPIENSV GGSIHRNYDL LLRHRLHIVQ EVHLPVNHCL LGVPGVNKEE IKRVLSHPQA
201: LDQCVNSLND LGIQRLSAKD TATAAQTVAS SGKKDVGAIA SVRAANIYGL DILAENIQDD ANNVTRFLIL SREPMIPRTD RPYKTSIVFS LEEGPGVLFK
301: ALAVFALRSI NLSKIESRPQ RRRPLRVVDG SNNGSAKSFD YLFYIDFEAS MAEIRAQHAL GHLQEFTSFI RVLGCYPMDL VR

Best Arabidopsis Sequence Match ( AT1G11790.1 )
(BLAST)

001: MALRCFPIWV CPQTTHHRSP LMGLAEFDAD KRRRFCLWEC SSSASQRAVT AIEGEIPFSR ELKKSSDELG LTQETQSLSF HRDLSMLPKP LTANSLYSSD
101: GDDSKVRISF QGIPGAYSET AALKAFPNCE TVPCEQFEAA FQAVELWLVD KAVLPIENSV GGSIHRNYDL LLRHRLHIVQ EVHLPVNHCL LGVPGVKKED
201: IKCVLSHPQA LDQCVNSLNN LGIQRISAKD TATAAQTVSS SGKIDVGAIA SVRAANIYGL DILAENIQDD VNNVTRFLIL AREPMIPRTD RPYKTSIVFS
301: LEEGPGVLFK ALAVFALRSI NLSKIESRPQ RRRPLRVVDG SNNGSAKYFD YLFYIDFEAS MADTRAQHAL GHLQEFASFI RILGCYPMDL VR

Arabidopsis Description

ADT1Arogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A178W336]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.